Gemmata sp. SH-PL17: VT84_11020
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Entry
VT84_11020 CDS
T04358
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ges03016
]
VT84_11020 (truB)
Enzymes [BR:
ges01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
VT84_11020 (truB)
Transfer RNA biogenesis [BR:
ges03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VT84_11020 (truB)
Prokaryotic type
VT84_11020 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AMV24921
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Position
2564101..2564967
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AA seq
288 aa
AA seq
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MNGLLVIDKPGGITSRDAVNRVQRWFPRKTKIGHTGTLDPLATGVLVVCIGAATRLADYV
QAMGKSYSSRFRFGATSTTDDADGEVTETPNAPVPTREQIDAALAAFVGNVEQVPPAVSA
LKLDGVRAHELVRRGLGPKLNARVVSIYAIRVTGFAWPYLDVEVDCGKGTYIRSIARDLG
DVLGCGGLVQTLRRTRVGPFRVEQGMSLDADPASAKLLPMAEAVAGMKHVSLNADDVTRL
RHGQRIRLPENNALPEGEELAVLDGQTGLVGIGIVERGQLKPQLVFGV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtcttttggtgattgataagccgggcggaataacctcgcgcgacgccgtgaac
cgcgttcagcgctggttcccgcggaagacgaagatcgggcacaccggcacgctcgacccg
ctcgcgacgggcgtgctcgtggtgtgcatcggtgccgcaacgcgcctggcggactacgtc
caggcgatggggaagagttattcgtcgcgcttccggttcggtgcgacgagtaccacggac
gacgcggacggcgaggtcacggaaaccccgaacgcgcccgtccccacgcgcgagcagatc
gacgcggcacttgcggcgttcgtcgggaacgtggagcaggtgccgccggccgtttccgcg
ctgaagctcgacggcgtccgcgcgcacgaactggtgcgccggggactggggccgaagctg
aacgcccgcgtggtatcgatctacgcgatccgcgtgacgggcttcgcgtggccgtatctc
gatgtcgaagtggattgcgggaaggggacgtacattcgttccatcgcgcgcgatctcggc
gacgtgctcgggtgcggcggactggtgcaaacgctccggcgcacgcgggtcggtccgttc
cgagtcgaacaagggatgagcttggatgcggaccctgcaagtgcgaaactgctcccaatg
gcggaagcggtcgcggggatgaagcacgtttccctgaacgcagacgacgtgactcgactg
cggcacggtcagcgtattcgattacctgagaacaatgccctgcccgagggcgaggaacta
gctgtgctcgacggccaaacggggctggtgggcatcggtatcgtcgaacgcggacaactc
aagcctcaactcgtgttcggggtttga
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