Gemmata sp. SH-PL17: VT84_11885
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Entry
VT84_11885 CDS
T04358
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00020
Citrate cycle (TCA cycle)
ges00190
Oxidative phosphorylation
ges00650
Butanoate metabolism
ges00720
Other carbon fixation pathways
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01120
Microbial metabolism in diverse environments
ges01200
Carbon metabolism
Module
ges_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ges_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ges_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VT84_11885 (frdA)
00650 Butanoate metabolism
VT84_11885 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VT84_11885 (frdA)
00720 Other carbon fixation pathways
VT84_11885 (frdA)
Enzymes [BR:
ges01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VT84_11885 (frdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
GIDA
Pyr_redox
NAD_binding_8
AlaDh_PNT_C
YjeF_N
FAD_binding_3
PALP
Motif
Other DBs
NCBI-ProteinID:
AMV25089
UniProt:
A0A142XDF6
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All DBs
Position
2785344..2787260
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AA seq
638 aa
AA seq
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MQLDARVPGGPMAEKWSRFKKDQRLINPANKSKYHVIVVGSGLAGGSAAASLAELGYKVS
CFCFQDSPRRAHSIAAQGGINAAKNYRNDGDSVHRLFYDTVKGGDFRSREANVHRLAEVS
VNIIDQCVAQGVPFAREYGGLLDTRSFGGAQLQRTFYCRGQTGQQLLLGAYQALSRQIGL
GTVKMYPRCEMLDLVVVDGKARGIVTRSLETGKIESHTADAVVLATGGYGNVFFLSTNAI
GCNVTATYRAYKRGAAFANPCYTQIHPTCIPVTGDHQSKLTLMSESLRNDGRVWVPKDKA
DCGKHPSEIPEAARDYYLERKYPSYGNLAPRDIASRAAKEACDDGRGVGPGARGVYLDFA
TAIAKQGRAKIEEKYSNLFEMYERITAESGYERPMRIYPAVHYTMGGSWVNYELMSSVPG
LFVVGEANFSDHGANRLGASALMQGLADGYFVLPYTLTHWLAGEKPGVTPTDHAEFKRTE
AEATERIKKLLSIKGKKTATELHRELGHVMWEKVGMARTKQSLEAAIARIQELRTEFWQN
VNVPGSDADLNTALERANRVSDFMEFGELLARDALVREESCGGHFRVEHQTPDGEAKRDD
EKFCHVAAWEYAGEGKTPIRNEEPLAFEAIKLVERSYK
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgacgcacgagttccgggcggcccgatggccgagaagtggtcgcggttcaag
aaggatcagcggctcatcaacccggcgaacaagtcgaagtatcacgtcattgtggtcggc
agcgggctggccggtgggagcgctgcggcgtcgctcgccgaactcggctacaaggtttcg
tgcttctgcttccaggattcgccccgccgggcgcacagcatcgccgcgcagggcgggatc
aacgccgcgaagaactaccgtaacgacggcgacagtgtccaccggctcttttacgacacc
gtgaagggcggcgacttccgctcgcgcgaggcgaacgttcaccggctcgcggaagtgagc
gtgaacatcatcgaccagtgtgttgcgcagggcgtgccgttcgcgcgcgagtacggcggg
ctgctcgacacccggagtttcggcggcgcccaactccagcgcacgttctactgccgcggg
caaacgggccagcaactcctcctcggcgcgtaccaggcgctcagccggcagatcggcttg
ggcacggtgaagatgtacccgcgctgcgagatgctcgacctcgtcgtggtcgacgggaaa
gcgcgggggatcgtcacccggagcctcgaaacgggcaagatcgagtcgcacacggccgac
gcggtagttctcgcgaccggcgggtacggcaacgtgttcttcctctcgacgaacgcgatc
gggtgcaacgtcacggccacgtaccgcgcgtacaagcgcggggcggcgttcgcgaacccg
tgctacacgcagatccacccgacctgcatcccggtgaccggcgaccaccagtcgaagctc
acgctgatgagcgaatcgctgcgtaacgacggccgcgtgtgggtgccgaaggacaaggcc
gattgcggcaagcacccgagcgagatccccgaggccgcgcgcgactactacctggagcgc
aagtacccgagctacgggaaccttgcgccgcgcgacatcgcgagccgggccgcgaaagag
gcgtgcgacgacgggcgcggggtcgggccgggcgcacgcggggtgtacctcgatttcgcg
accgcgatcgcgaagcaggggcgcgcgaagatcgaggagaagtacagcaacctgttcgag
atgtacgagcgcatcaccgccgagagcgggtacgagcgcccgatgcggatctaccccgcg
gtccactacacaatgggcgggtcgtgggtgaactacgaactcatgtcgagcgtgccgggg
ttgttcgtggtcggcgaggcgaacttctcggaccacggggcgaaccggctcggcgcgtcc
gcgctcatgcagggactggcggacgggtacttcgtgctcccgtacacgctcacgcactgg
ctggcgggcgagaagcctggcgtgactccgaccgaccatgcggagttcaagcgcaccgag
gccgaggccacggaacgcatcaagaaactgctctccatcaaggggaagaagaccgcgacc
gaactgcaccgcgaactcggtcacgtgatgtgggaaaaagtcggcatggcccgcacgaag
cagagcctggaggccgcgattgcgcgcatccaggaactgcgcaccgagttctggcagaac
gtgaacgtgccgggcagcgacgcggacctgaacaccgcgctcgaacgggcgaaccgcgtc
tctgacttcatggagttcggcgaactgctggcccgcgacgcgctggtacgcgaagagagt
tgcggcgggcacttccgcgtggagcaccagacaccggacggcgaagcgaagcgcgacgac
gaaaaattctgccacgtcgccgcgtgggagtacgcgggcgagggcaagacgccgatccgc
aacgaagaaccgctcgcattcgaggcgatcaaactcgtcgagcggagctacaagtaa
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