Gemmata sp. SH-PL17: VT84_12835
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Entry
VT84_12835 CDS
T04358
Symbol
recD2_2
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VT84_12835 (recD2_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_12835 (recD2_2)
Enzymes [BR:
ges01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VT84_12835 (recD2_2)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VT84_12835 (recD2_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PIF1
DEAD
AAA_22
nSTAND3
AAA_28
SLFN-g3_helicase
AAA
NTPase_1
AAA_16
UvrD-helicase
AAA_5
NPHP3_N
HHH_3
PhoH
Herpes_Helicase
bpMoxR
T2SSE
AAA_29
MeaB
Mg_chelatase
TrwB_AAD_bind
ATPase_2
TsaE
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMV25278
UniProt:
A0A142XE20
LinkDB
All DBs
Position
complement(2993209..2995608)
Genome browser
AA seq
799 aa
AA seq
DB search
MAEQVTGVIERITHHNPDTGYCVLRVVARGHRDILTVVGSAQQIVAGEYITATGAWVTDR
NYGLQFKASEIKTNPPHTVEGIAKYLGSGLVKGIGPGYAKRIVEVFGEKTLDVIDKSPEY
LSQVKGIGAKLIEKIRRSWEEQRESRKIMVFLQSHGIGTARAVRIYKTYGDQAIELIKAN
PYRMSADIWGVGFDTADKLAVSLGIPRDSPFRAQAVVRHVLQEETGNGHVGYPEELLRER
AAEMTGIEPNGIIDAIEQLRITDEIVRDSIGKATGGRLPTPPSPLPEGKGEKQRQPNPLT
PFPKKEGRTEPNTQATTPQATVLSPSPLGGGVGEGLQTGSTTGGAGFTLEDNLIFLKPFF
LAELGVARAIKALAQGPHPLPSVNVDAAVAWVEKKMGIAFAASQRAAIKAAVTHKLMVVT
GGPGTGKTTIVRAIIEMFLAKSLRVLLTAPTGRAAKRLYESTGREAKTIHRLLEFNPQQR
QFTRNAEDPLDVDLLVVDETSMVDIVLMNKLLQAVPPYACVVLVGDVDQLPSVGAGAVLT
DLIESKAVPVARLTEVHRQAESSWIVRAAHAINHGVEPESAPPGGNGDFYFIEANDPDAI
TERVVQMVRDRIPAKFKLDPFRDIQVLSPQVKTPLGVANLNRELQAALNPARPGVAEVKR
YDSVYREGDKVMQVQNNYDREVFNGDIGRIEKIDNDDQMLVVDFDGRPVEYEFNELDELQ
LSFACTIHKSQGSEYPAVVIPVHTQHFVMLQRNLLYTGITRGRKLVALVGSRKAMWIAVN
TADTKRRYSLLKYRIKPEN
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacaagtcaccggagtgatcgagcgcattacgcaccacaacccggacaccggg
tactgtgtgctgcgggtcgtcgcgcgcgggcaccgcgacatcctcacggtcgtcgggagc
gcccagcagatcgtcgcgggcgagtacatcaccgcgaccggggcgtgggtcacggaccgc
aactacgggctccagttcaaggcgagcgagatcaaaacgaacccgccacacaccgtggaa
gggatcgcgaagtacctcggttccggtctcgtgaaggggatcggccccggctacgcgaag
cgcatcgtggaggtgttcggcgaaaagacactcgacgtcatcgacaagtcgcccgagtac
ctgtctcaagtcaagggcatcggcgcgaagctgatcgagaagatccggcggagctgggaa
gaacagcgcgaatcgcggaaaatcatggtcttcctccagtcacacggcatcggcaccgcg
cgcgccgtgcgcatttacaagacctacggcgaccaggcgatcgaactcatcaaagcgaac
ccgtaccgcatgagcgcggacatttggggcgtcgggttcgacaccgcggacaaactcgcc
gtcagtttgggcatcccacgcgactccccgttccgcgcgcaagcggtggtgcgccatgta
cttcaggaagaaaccgggaacgggcacgtcggctaccccgaagaactgctccgcgaacgc
gcggccgaaatgacggggattgagccgaacggcatcatcgacgcgatcgaacaactgcgc
atcacggacgagatcgtgcgcgacagtatcgggaaggcgactgggggacggttacctacc
cccccgtcccccctccctgaagggaagggagaaaagcaaagacaacctaaccccctaacc
cccttccctaagaaggaagggagaacagaaccaaatacacaggcaaccacaccccaagcg
acggttttaagcccctctccccttgggggaggggttggggaggggttacagacggggagc
acaaccggcggcgcgggtttcaccctcgaagacaacctcatcttcctgaagccatttttc
ctggcagaactcggtgtcgcgcgagccatcaaggcgctcgcgcaggggccgcacccgctg
ccctcggtgaacgtagacgctgcggtcgcgtgggtcgagaagaaaatggggatcgcgttc
gcggcgagtcagcgcgcggcgatcaaggccgcggtcacgcacaaactcatggtggtgacg
ggcggccccgggaccgggaagacgaccatcgtgcgggccatcatcgaaatgttcctcgcg
aagtcgctccgcgtgctgctaacggcccccaccgggcgcgcggccaagcgcctctacgag
tccaccgggcgcgaggccaaaaccatccaccgattgctggagttcaacccgcagcagcgc
cagttcacgcgcaacgccgaagacccactcgacgtcgacctgctcgtggtcgacgagacg
tcgatggtcgacatcgtgctgatgaacaagctgctccaggccgtcccgccgtatgcgtgc
gtggtgctcgtgggggacgtggaccagctcccgtcggtcggggccggggccgtgctgacg
gatctcatcgaatcgaaagcggttcccgtcgcccgactcaccgaggtccatcgccaggcc
gagagcagttggatcgtgcgcgccgcgcacgcgatcaaccacggtgtggaacccgaatcc
gccccgccgggcggcaacggggacttctacttcatcgaagcgaacgacccggacgcgatc
accgagcgcgtcgtccagatggtgcgagaccgcatcccggcgaagttcaagctcgacccg
ttccgcgacatccaggtgctctcgccacaagtgaagacgcccctcggggtcgcgaatctg
aaccgagaactgcaagcggcactaaatcccgcgcgcccgggtgttgcggaagtcaagcgg
tacgattcggtgtaccgcgaaggcgacaaggtgatgcaggttcagaacaactacgaccgc
gaggtgttcaacggcgatatcggtcgcattgagaagatcgacaatgacgatcagatgctg
gtggtggacttcgacgggcgcccggtcgagtacgagttcaatgaactagatgagctccag
ttgtcgttcgcgtgcaccattcacaagagccaggggagcgagtacccggccgtcgtgatc
ccggtccacacgcagcacttcgtgatgctccagcggaacctgctctacacgggcatcacg
cgcgggcgcaagttggtcgcgctcgtcgggagccgcaaagcgatgtggatcgcggtcaat
acggccgacaccaagcggcgctactcgctactgaaataccgcatcaaaccagaaaactaa
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