Gemmata sp. SH-PL17: VT84_13190
Help
Entry
VT84_13190 CDS
T04358
Symbol
sigE_21
Name
(GenBank) ECF RNA polymerase sigma factor SigE
KO
K02005
HlyD family secretion protein
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
VT84_13190 (sigE_21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
BSH_CzcB
Sigma70_r2
BSH_RND
YknX_C
Beta-barrel_RND_2
Sigma70_r4
RND-MFP_C
BSH_CusB
Peptidase_M23
PhyR_sigma-like
HTH_23
BSH_YknX
HTH_28
CzcB_C
Glyco_hydro_32C
Motif
Other DBs
NCBI-ProteinID:
AMV25349
LinkDB
All DBs
Position
complement(3079260..3081386)
Genome browser
AA seq
708 aa
AA seq
DB search
MSHGPRRLPRIPALSPTGPPVDADLLARFISTGDEVAFELLVRRHAPMVLAVCRRVLTDP
NDADDAFQATFLVLARKAASVARAEVLAGWLYRIAYRAAVRVRSDRLRRATHTDANPDLL
PAPSADPNARELERVLDEEVAKLPERHRVAFVLCCLEGKTGEEAGRLIGCPPGTVSSRLT
RARERLRERLTHRGFAPALVVTVLSACAESAATVSALTALIDSTVHAAPGFATRRPTAPL
TARPATIAEGVIRTMHATKLKSLALLFALGLLAVGGVFAAPNAGPEEEPNQPPKAKVGGA
QKAPAAPVVRVVQPQRGGLDRISRHIGSVEPLQQADLFATTAGTLKRVNVNLGDHVKRGQ
LLSEIDAPALTLEERQALISVEQAKGLLSEAEAGLPAARAVINTAKLVVKQRETEEAGAK
AALVIWKKKYEMTVKISGPITSDASDAELRLRTAEAQFEGATVAVESAKSDITVKQSKLL
QAEANVGAAKTTIEAAHLALEKARFALAQTKIVAPFDGVVTRQNASAGDHVRPTERDADR
ALFTLTRVDRVRLVTAIPESEVARATVGVVAVVTFPSRPGVRISEKISRIGFAVDPKTAT
MRVEVDVPAATNDIRPGMIGEVTLTLGKGPADALRVPLSAITEGPKERPAGSHGVYVYRD
GKARLTFVKVSQHSENEVEIASGLTADDLVVVDPKGLGSKPEVAVKLE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgagccacggaccgcgccgattaccccgaatcccggctctcagcccgaccggtccaccg
gtcgacgcggacctgctcgcgcggttcatcagcacgggcgacgaggtcgcgttcgagcta
ctcgttcgccggcacgcgccgatggtcctcgcggtctgccgccgcgtgctcacggacccg
aacgacgccgacgatgcgttccaggccacgttcctggtgctcgcgcgcaaggcggcctcg
gttgcgcgggcggaagtgctcgcagggtggctctaccggatcgcgtaccgggccgcggtt
cgggtccgttcggaccgactccgccgcgcgacgcacacggacgcgaaccccgaccttctc
cccgccccatcagctgacccgaacgcgcgagaactggagcgcgtgctggacgaggaagtc
gcgaagttaccggagcggcaccgggtcgcgttcgtcctctgctgtttggaaggtaaaacc
ggcgaagaagcggggcgcctgatcgggtgcccgcccggaaccgtctcctcgcgattgacg
cgcgcacgcgagcgcctccgggagcgcctgacccaccgggggttcgctccggcactcgtc
gtcaccgtgctgagtgcgtgcgccgaaagcgcggcgaccgtgtccgcactgaccgcactc
attgattccaccgttcacgctgcgcccggtttcgcaacccggcgcccaacagccccgctc
accgctcgacccgccacgatcgcggaaggagtgatccgaaccatgcacgcgaccaagctc
aaatccctcgctctcttgtttgccctgggtcttctcgcggtcggcggcgtgttcgccgca
ccgaacgccggccccgaagaggaaccgaaccaaccgccgaaggcgaaagttggaggcgcg
cagaaagccccggccgctcccgttgttcgggtcgttcaaccgcagcgcggcggactagac
cgaatctccaggcacatcggcagcgtcgagccgctccaacaagccgatttgtttgccacg
accgcaggaacgttgaagagggtcaacgtgaacctcggcgatcacgtcaaacgtggtcaa
ctcctgtccgaaatcgatgcgccggcactcacactggaagagcgtcaggcactgatcagt
gttgaacaggcgaaaggtttactcagcgaggccgaagccggcctccccgctgccagagca
gtaatcaacaccgccaagctcgtcgtgaaacagcgcgaaaccgaagaagccggagccaaa
gctgccctcgttatctggaagaaaaagtatgagatgaccgtcaaaatttcagggccaatt
acatcggacgcttctgatgccgaactgcgtttgcgtacagccgaagcccaatttgaaggt
gcgacggtagccgttgaaagcgcgaaaagtgacatcaccgtgaagcagagcaagctgctt
caagccgaagccaatgtgggtgccgctaaaaccaccatcgaagccgcccacctcgcactg
gaaaaagccagattcgcattggctcaaaccaaaatcgtggccccgttcgacggggtcgtg
acccggcagaacgcctccgccggcgaccacgtgcgccccactgaacgagacgccgaccga
gcattgtttaccctcacgcgcgtggaccgcgtgcggctcgtgacagcgatccccgaatcg
gaagtggctcgcgctacagtgggtgtcgttgcggttgtcacgtttccctcgcggcccggg
gtacgcatcagtgaaaagatctcgcggatcgggttcgcggttgatccgaagacggcgacg
atgcgcgtcgaggtcgatgtcccggctgcgaccaacgacatccgaccgggcatgatcggt
gaggtcacgctgaccctcggaaaagggccggcggacgcgcttcgcgtgccactcagcgcg
attaccgagggaccgaaggaacggcccgcaggttcgcacggtgtgtacgtgtatcgcgac
ggcaaagctcggctcaccttcgtaaaagtcagccagcacagcgagaatgaagtcgagatc
gcatccggtctgacagcggatgatctcgttgtggtcgatcccaaggggttgggatcgaag
cccgaagttgcggtcaagctcgagtga
DBGET
integrated database retrieval system
