Gemmata sp. SH-PL17: VT84_14805
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Entry
VT84_14805 CDS
T04358
Symbol
rluD_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ges03009
]
VT84_14805 (rluD_1)
Enzymes [BR:
ges01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VT84_14805 (rluD_1)
Ribosome biogenesis [BR:
ges03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT84_14805 (rluD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
ThiS
Motif
Other DBs
NCBI-ProteinID:
AMV25665
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Position
complement(3414133..3414993)
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AA seq
286 aa
AA seq
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MQQLPSPASEVPLLEWLLHALAPMNRTRVKQVLRSGRVAVNGAPITRHDHPVRPGDQITI
ARDAPAPAADLAGIAIVHEDAHLIVIDKPSGLLTVATESEKTDTAFVRLSTHLAARNAGR
PFVVHRLDRDTSGLLLFARSAEVRDQLQADWEDVTKTYLAVVEGTPSPARGTAENFLTEG
RDLRVRAGRTPGKDAKRAVTRYQTREARGRYALVEVELETGRKHQIRVHMAGLGCPVAGD
KMYGATTDPARRLCLHAWRLAFDHPFSGARVEAESPFPTALARVVG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacttccgtcgcccgcgtccgaagttccactcctggaatggctgctccacgca
ctcgcgccgatgaaccgcacgcgcgtgaaacaggtgctgcgctccgggcgcgtcgcagtt
aacggcgctccaatcacccggcacgaccacccggtgcgcccgggtgaccagataaccatc
gcacgcgacgcacccgcaccggccgcagatctggccgggatcgccatcgttcacgaggac
gcgcacctcatcgtgatcgacaagccctccggactgctcaccgtggccactgaatcggag
aagacggacaccgcgtttgtgcggctgagtacgcatctcgccgcgcgtaacgccgggcgc
ccgttcgtcgttcaccggctcgaccgcgacacgtccgggttgctcctcttcgcccgtagc
gccgaggttcgcgaccaactccaggcggactgggaggacgtaaccaagacctacctcgcg
gtggtggaggggacaccgtccccggcccgaggaacggccgagaactttctgaccgagggg
cgagacttgcgcgtgcgggcgggacgcaccccgggcaaggacgcgaagcgcgcggtaacg
cggtaccagacgcgcgaggcgcgcgggcggtacgcgctcgtggaggtggaactggaaacc
gggcgcaagcaccagatccgggttcacatggcagggttggggtgcccggtcgcgggtgac
aagatgtacggcgcgaccactgatcccgcgcgccggctgtgcctgcatgcctggcgcctc
gcgttcgaccacccgtttagcggagcgcgcgtggaagcggaatcccccttccccaccgcg
ctcgcgcgggtcgtggggtaa
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