Gemmata sp. SH-PL17: VT84_15905
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Entry
VT84_15905 CDS
T04358
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ges02000
]
VT84_15905 (msbA)
Transporters [BR:
ges02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
VT84_15905 (msbA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Motif
Other DBs
NCBI-ProteinID:
AMV25883
UniProt:
A0A142XFV0
LinkDB
All DBs
Position
complement(3675587..3677812)
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AA seq
741 aa
AA seq
DB search
MGSTALAQIHSSFVKSPSARWGSLLCSVGAAITYVLLLLLLYLFVDLLVWRGEIPTYAQL
SAARKREFADEWATRSDADRAEAVARLGWPVHRAKRLETRTDDDLKPIAKAPAEEHLFAD
EWDARWHAGVYLALRDRVNQSAADNYLPPPGWERADKADSADPEARPQFGVLSLVVRERN
RWTGPVLGWVASWNPWTWAPGPKGSANVPYLTGLFILAFGIAAVRGILVNALTYVSAAVT
LDAIIRLRRAVYFHSYRLGPITMQTLGTEEVANLMTRRVEEIGAAIQAQFASTVRYRLLV
VLLIGLIVLVNFWLALSFLALAALVWLVGGQVAAHFRREGRIGERQAATTLALLKESMSL
FRLVKCFQMERFNQNRVERQLAESARANWRRLRGGEMAGPLLNSVVVLTGVALLYLAARG
VLAGGFSVAGLAVLTVALVSLAIPIAGLFDRALKVRRGREAADAVFEFLERRGEAAEAAD
AEFLPGLTTRMEFRHVTLNDPATGETILKDVTFAVPAGASVAIVGQNAAEKHALVSMIPR
FLDPTSGEIRIEDKNIRWVTHESLRTQVALVMQDDLTFTDTAANNIGVGDPSHNLPQIIE
AAKLAHAHQFIEKLPFGYETLIGNGGHSLTPGERFRIALARALLRDPSILIIEEPTGPVD
EDTLALLDDTLVRVSAGRTVLFLAQRLSTLRNVDRVFLLKDGLLEADGAHDDLWKSNDSY
RRLQILADATATEHPVLKTDS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagcacggcactcgcgcaaatccacagcagttttgtgaagtcccccagcgcccgc
tggggatcgctgctctgttccgtcggagccgctatcacttacgtgctcctgctcctgctc
ctctacctcttcgtcgacctgctcgtttggcggggcgagatccccacctacgcacagctc
tcggccgcccgaaaacgcgagttcgcggacgaatgggccacccgatcggacgcggaccgc
gccgaagcggtcgcgcgattggggtggccggtccaccgggcgaagcggctcgaaacccgc
acggacgacgacctgaagccgatcgcgaaagcaccggctgaagagcacctgttcgccgac
gagtgggacgcgcggtggcacgcgggcgtgtacctcgcgctgcgggaccgcgtgaaccag
agcgcggccgataactacctgccgcccccgggctgggagcgcgcggacaaggccgacagc
gcggacccggaagcgcgccctcaattcggcgtattgagtctcgttgtgcgcgagcgcaac
cggtggaccggcccggttctcggctgggtcgcgtcgtggaacccgtggacctgggcgccg
ggaccgaaaggttccgccaacgtgccctatctgaccgggctgttcatcctggcgttcggc
attgcggcggtgcgcgggattcttgtcaacgcgctgacatacgtctcggccgcggtcact
ctcgacgcaatcatccgcctccggcgggcggtctacttccactcgtatcggctcgggccg
attacgatgcaaaccctgggtacggaagaagttgcgaacctgatgacgcgccgcgtcgag
gaaatcggcgccgcgatccaggcccaattcgcgtccacggtccggtaccgactgctcgtg
gttctcctgatcggcttgattgtgctggtgaacttctggctggcgctcagtttcctcgct
ctggccgcgctcgtgtggctggtcggagggcaagtagccgctcacttccggcgcgagggg
cgcatcggcgaacgtcaggccgcgaccacactcgcgctcctgaaagagagcatgtcgctg
ttccgattggtgaagtgtttccagatggaacgcttcaaccaaaaccgagtggagcgccaa
ctcgcggaatcggcgcgggcgaactggcgccggctccgcggcggtgaaatggccggtccg
ctgctgaactcagtggtggttctgacgggcgtcgcattactatacctcgccgcacgcggg
gttctggccggcgggttctcggtcgcggggctcgcggttctgacggtcgcactggtttcg
ctcgcgatcccgatcgcggggctgttcgatcgtgccctgaaggtccggcgcgggcgtgaa
gccgcggacgcggtcttcgagttcctcgaacgacgtggcgaagcggccgaagcagccgac
gcagagttcctcccggggctgacgacccgcatggagttccgacacgtcacgctcaacgac
ccggcgaccggggaaacgatcctgaaggacgtgacgttcgcggtccccgccggtgcgagc
gtcgccatcgtgggccagaacgcggccgagaagcacgcgctcgtgtccatgatcccgcgg
ttcctcgacccgacctccggcgagatccggatcgaggacaagaacatccgctgggtcacg
cacgagtcgctccgcacgcaggtcgcgctcgtgatgcaggacgacctcacgttcaccgac
accgcggcgaacaacatcggcgtcggcgacccgtcgcacaacctgccgcaaatcatcgaa
gccgcgaaactcgcgcacgcccaccagttcattgagaaactgccgttcggctacgaaaca
ctcatcggcaacggcgggcactcgctcaccccgggcgagcggttccggatcgcactggcg
cgcgccctgctccgcgacccgtcgatcctcatcatcgaggaaccgaccggccccgtggac
gaagacacgctcgcactgctcgacgacaccctcgtgcgcgtgtccgcgggccgcaccgta
ctcttcctcgcgcagcggctctcgacgctccgcaacgtggaccgcgtgttcctcctgaaa
gacggattgctcgaggccgacggcgcgcacgacgatctctggaagtccaacgacagttac
cgccggctgcaaattctcgccgacgcgaccgccaccgagcaccccgtgctgaagaccgat
tcgtaa
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