Gemmata sp. SH-PL17: VT84_15925
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Entry
VT84_15925 CDS
T04358
Symbol
thiC
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00730
Thiamine metabolism
ges01100
Metabolic pathways
ges01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VT84_15925 (thiC)
Enzymes [BR:
ges01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VT84_15925 (thiC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
Motif
Other DBs
NCBI-ProteinID:
AMV25887
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Position
3682676..3684004
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AA seq
442 aa
AA seq
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MTQLESARKGIVTPEMEFVAKREDLHPELVRAEVARGRMVIPANTVHLAKGLQPMCIGVA
ARCKINANIGNSAVTGKADDELEKLRTAVELGSDTVMDLSTGGNIDGIRQAIIDASPVPI
GTVPVYQIIQNVKDPRDITPRQLLDMVEHQAKQGVDYMTIHAGVLLEYVALTSERVTGIV
SRGGSLMAGWMVAHHQQNPWFTHFGELCEIMRKYDVTFSLGDGMRPGCLADANDKAQFSE
LKTLGDLTLKAWEMGCQVMIEGPGHIPMHLVKMNIEKERELCHDAPFYVLGPLVTDIAPG
YDHITSAIGAALAAEAGASMLCYVTPKEHLGLPNKDDVRQGVIAYKIAAHAGDIARGRKN
VRDRDDALSKARFEFDWNRQFELSLDPETARRMHDETLPQDVFKSAKFCSMCGPKFCSMR
ITQDVRKLAADAKKLSLELAVV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgacccagctcgaatccgctcgcaagggcatcgtcacgccggagatggagttcgtcgcg
aagcgcgaagacctgcacccggaactggtccgcgccgaggtcgcgcgcgggcgcatggtc
atccccgcgaacacggtccacctcgcgaagggcctccagccgatgtgcatcggcgtcgcg
gcgaggtgcaagatcaacgcgaacatcggcaactcggccgtgaccggcaaggccgacgac
gaactggaaaaactccgcaccgcggtcgaactcgggtccgacacggtgatggacctgtcc
accggcgggaacatcgacggtatccgtcaggcgatcatcgacgcctcgcccgtgccgatc
ggtaccgtcccggtgtaccagatcattcaaaacgtcaaagacccgcgcgacatcaccccg
cgccaactcctcgatatggtggagcaccaggcgaagcagggcgtggattacatgacgatc
cacgcgggcgtgctcctcgaatacgtcgcgctcacgagcgagcgcgtgaccggtatcgtg
agccgcggcgggtcgctgatggccgggtggatggtcgcgcaccaccagcagaacccctgg
ttcacgcacttcggcgaattgtgcgagatcatgcgcaagtacgacgtgacgttctcgctc
ggcgacgggatgcgccccgggtgcctcgcggacgcgaacgacaaggcgcagttctccgaa
ctgaagacgctcggcgacctgacgctgaaggcgtgggagatggggtgccaggtgatgatc
gagggaccggggcacatcccgatgcacctcgtgaagatgaacatcgaaaaagagcgcgaa
ctgtgccacgacgcgccgttctacgtgctcgggccgctcgtgacggacatcgcgccgggc
tacgaccacatcacgagcgcgatcggcgcggcgctcgcggccgaggccggcgcgagcatg
ctgtgctacgtgaccccgaaggagcacctgggcctgccgaacaaggacgacgtgcgccag
ggcgtgatcgcgtacaagatcgcggcccacgccggcgacatcgcccgcgggcgcaagaac
gtgcgggaccgcgacgacgcgctctcgaaggcccggttcgagttcgactggaaccgccag
ttcgagctctcgctggacccggaaaccgcgcgccggatgcacgacgagacgctcccgcag
gacgtgttcaagagcgcgaagttctgctcgatgtgcgggccgaagttctgctcgatgcgg
atcacccaggacgtgcgcaagctcgccgccgacgcgaagaaactgagcctggaactggcc
gtggtgtga
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