Gemmata sp. SH-PL17: VT84_16320
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Entry
VT84_16320 CDS
T04358
Symbol
rluB
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ges03009
]
VT84_16320 (rluB)
Enzymes [BR:
ges01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
VT84_16320 (rluB)
Ribosome biogenesis [BR:
ges03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT84_16320 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AMV25965
UniProt:
A0A142XG84
LinkDB
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Position
complement(3790252..3791040)
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AA seq
262 aa
AA seq
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MQRLNKYLAHAGVGSRRHCDKLIAAGRVKVDGVRVKELGLKIDPAHHQVAVDDQPVKAEK
LVYWAVNKPVGHLCTNHDPAGRPRAVDLLPHVEQRVYTVGRLDEGSDGLLLMTNDGDLAM
GLTHPRYGVPKTYFVLVAGRPTDEDLQKLLDGVWLSDGKVRAKSVKRVKAQGNGTWLRVI
LTEGKNREIRRMLAKLDHKVMRLKRVAIGPVKLDKLPKGKARRISEDELKELKLFVTKSQ
EKITAARLRASEKKADPGDRPA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcctcaacaagtatctggcgcacgcgggggtcggttcgcggcgccactgtgac
aaactcatcgccgccgggcgcgtgaaggtggacggcgtccgggtcaaggaactcgggctg
aagatcgaccccgcgcaccaccaggtcgcggtcgacgaccagccggtgaaggccgagaaa
ctcgtctactgggcggtgaacaagcccgtcggtcacctctgcacgaaccacgaccccgcc
gggcgcccccgcgcggtcgatctgctcccgcacgtcgaacagcgcgtctacaccgtcggg
cggctcgacgagggcagcgacgggctgttgctgatgaccaacgacggcgacctcgcgatg
gggctgacgcacccgcggtacggcgtgccgaaaacgtacttcgtgctcgtcgccgggcgc
cccaccgacgaagatctccaaaaactgctcgatggcgtttggctgagcgacggtaaggtg
cgtgcgaagagtgtcaagcgggtaaaggcgcaggggaacggcacttggctccgcgtgatc
ttgactgaggggaagaatcgcgaaatccgccggatgctcgcgaagctcgaccacaaggtg
atgcgcctgaagcgcgttgcgatcggtcccgtgaaactggacaagctgccgaagggcaag
gcgcgccggatcagcgaagacgagttgaaagaactcaagttatttgtgacgaagtcgcag
gaaaagatcaccgccgcgcgcctgcgggccagcgagaagaaagccgatccgggcgatcgc
cctgcgtaa
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