Gemmata sp. SH-PL17: VT84_16520
Help
Entry
VT84_16520 CDS
T04358
Symbol
rluD_2
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ges03009
]
VT84_16520 (rluD_2)
Enzymes [BR:
ges01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VT84_16520 (rluD_2)
Ribosome biogenesis [BR:
ges03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT84_16520 (rluD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
bHLH_HIF1A
SP2
Motif
Other DBs
NCBI-ProteinID:
AMV26005
LinkDB
All DBs
Position
complement(3837428..3838399)
Genome browser
AA seq
323 aa
AA seq
DB search
MSFALPPFTVAPQEAGFTLAKVLRSRLGGPSWTDVRKLIAARRVKVGDAICSDEARRVKE
DEVVVLLEHPKPLPRAAHPERLVVRHLDEHVVVVEKPAGVNTVRHPAELEWSEQRRELDP
TLQDLAQWAIAHQLNRAPRDLNGLRIVHRLDKETSGLVVFARSVLAERELGLQFRKHTVV
RRYLTVVPGILSAQTIRSRLVEDRGDGRRGSTKLTGVGKEAVTHIALEERLPGYTLLSCR
LETGRTHQIRIHLSEAGHPVCGDKVYVKRANGEVFDDKSEAPRLALHATELGFEHPATNA
HLHWSMPLPGDLQKFVEKLRGKS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgcactccccccattcaccgttgccccgcaagaagccgggttcacgctcgcg
aaagtgctgcgatcgcggctcggcgggccgtcgtggaccgacgtgcgcaaactcatcgcc
gcgcgccgcgtgaaggtcggcgacgcgatctgctcggacgaggcgcgccgcgtgaaggaa
gacgaggtcgtggtgctcttggagcaccccaagccgctcccgcgcgccgcacacccggag
cgactcgtcgtccggcacctcgacgaacacgtggtcgtggtcgagaagcccgcgggcgtg
aacaccgtccggcaccccgcggaactggagtggtccgaacagcgccgcgaactcgacccc
acgctccaggatctcgcgcagtgggccatcgcccaccaactcaaccgcgcgccgcgcgac
ttgaacgggctgcggatcgtccaccgactcgacaaggaaacgagcgggctggtagtgttc
gcgcgctcggtactcgccgagcgcgaactcggactccagttccgcaagcacaccgtcgtc
cggcgctacctcaccgtggtgcccggcattctgagcgcgcaaacgatccgctcgcgcttg
gtcgaagaccgcggcgacggccggcgcgggagcacgaaacttaccggcgtgggcaaagaa
gccgtcacacacatcgcgctggaagaacggctcccgggctacacactgctctcgtgccgg
ctcgaaacgggccgcacgcaccagatccgcatccacctctcggaagccgggcacccggtg
tgcggcgacaaggtgtacgtgaagagggccaacggcgaggtgttcgacgacaagagcgaa
gccccgcgcctcgcgctccatgccacggaactgggcttcgagcaccccgccaccaacgca
cacctgcactggtcgatgccgctccccggcgacctgcaaaagttcgttgagaagttgagg
ggcaaatcgtaa
DBGET
integrated database retrieval system
