KEGG   Gemmata sp. SH-PL17: VT84_18260
Entry
VT84_18260        CDS       T04358                                 
Symbol
ddl_1
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ges  Gemmata sp. SH-PL17
Pathway
ges00470  D-Amino acid metabolism
ges00550  Peptidoglycan biosynthesis
ges01100  Metabolic pathways
ges01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ges00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    VT84_18260 (ddl_1)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    VT84_18260 (ddl_1)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    VT84_18260 (ddl_1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ges01011]
    VT84_18260 (ddl_1)
Enzymes [BR:ges01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     VT84_18260 (ddl_1)
Peptidoglycan biosynthesis and degradation proteins [BR:ges01011]
 Precursor biosynthesis
  Amino acid ligase
   VT84_18260 (ddl_1)
SSDB
Motif
Pfam: Dala_Dala_lig_C ATP-grasp_3 ATP-grasp_4
Other DBs
NCBI-ProteinID: AMV26347
UniProt: A0A142XH04
LinkDB
Position
4233516..4234538
AA seq 340 aa
MRIGIACTLKPDGPLPTGAPDDLHEEFDSPVTVKAIGDVFRALGHTVVELGDGRPFLEAV
LKNPPDLVFNFAEGAGVSRSRESRVPAVCEMLGIPYTGSDPLALAVALDKDMTRRVAESL
GVTVPKGITLAPVPGEYDGDFAEFPPILEEAGLSLPVIAKPTCEGSSKGIRNRCLIKTAA
EFGPTVVSLWKDYQQPVLVEEFIAGDEVTIGLVGSDPPQSIGIMHVIPKTANADFVYSLE
VKRNWHDAVDYVAPAKLPPDVTRAIEADAMAVYAGLGCRDVARLDFRVRAGVPYFLEVNP
LPGLNPESSDLCYLAYRMGLTYPELIGMILDAAVTRYGLR
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgcgaatcggaatcgcgtgcaccctgaaaccggacggcccgctcccgaccggggcaccg
gacgatctccatgaagagttcgattctcccgttaccgtgaaggccattggtgacgtgttc
cgtgcgctcggtcacacggttgtggaactcggcgacgggcgcccctttctcgaagccgtt
ctcaagaacccgcccgatctggtgttcaacttcgcggaaggggcgggtgtgagccgctcg
cgcgagtctcgtgtccccgctgtgtgcgagatgctcggcatcccgtacacgggttccgac
ccgctcgcattggcggtcgcgctcgacaaggacatgacgcgccgcgtcgcggagtcgttg
ggcgtaacggtgccgaaggggatcacgctcgcaccggttccgggcgaatacgacggcgat
tttgcagagttcccgccgatcctcgaagaagccgggctgtcacttcccgtgatcgcgaaa
ccgacctgcgagggatcgagcaagggcatccgcaaccggtgcctcatcaagacggccgcg
gagttcggcccgactgtggtgagcttgtggaaggactaccagcaaccggtgctggtcgag
gagttcattgccggtgacgaggtgacgatcggcctcgtcgggagcgacccgccgcaatcg
atcggcatcatgcacgtgatcccgaagacggcgaacgcggacttcgtttacagtttggaa
gtgaagcggaactggcacgacgcggtcgattacgtagcgcccgcgaaactcccgcccgat
gtgacccgcgcgatcgaagcggacgcgatggccgtttacgccggcttggggtgccgcgac
gtcgctcgattggacttccgcgtgcgcgccggagtgccgtactttttggaggtgaacccg
ctcccggggctgaaccccgaatccagcgacttgtgttacctcgcgtaccgcatggggcta
acgtacccggaactcatcggcatgattctggacgcggcggtgacgcggtacgggctacgg
tag

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