KEGG   Gemmata sp. SH-PL17: VT84_18430
Entry
VT84_18430        CDS       T04358                                 
Symbol
polA_2
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ges  Gemmata sp. SH-PL17
Pathway
ges03030  DNA replication
ges03410  Base excision repair
ges03420  Nucleotide excision repair
ges03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ges00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VT84_18430 (polA_2)
   03410 Base excision repair
    VT84_18430 (polA_2)
   03420 Nucleotide excision repair
    VT84_18430 (polA_2)
   03440 Homologous recombination
    VT84_18430 (polA_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ges03032]
    VT84_18430 (polA_2)
   03400 DNA repair and recombination proteins [BR:ges03400]
    VT84_18430 (polA_2)
Enzymes [BR:ges01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VT84_18430 (polA_2)
DNA replication proteins [BR:ges03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     VT84_18430 (polA_2)
DNA repair and recombination proteins [BR:ges03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     VT84_18430 (polA_2)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VT84_18430 (polA_2)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 DNA_pol_lambd_f HHH_5 RNase_H_2
Other DBs
NCBI-ProteinID: AMV26381
UniProt: A0A142XHK4
LinkDB
Position
4279085..4282051
AA seq 988 aa
MSDPVSAGNLYLLDAHGLIFQMFFGVPPMNAPDGRPANAVFGVTRSLMNLYDRGADYLIA
ALDHAEPTFRETIDSNYKAHRDPPPDDLLLQEPLIQQVMEAMRVPFLIAKGYEADDVMAT
VASAAAARGLNVFLCTSDKDCRQLVTDKVKMLNLRKDYEVLDAAGIIADWGVRPDQVVDF
QSLVGDSVDNIPGVMGVGPKTAAKWLQQYGTLDELIAHADEAPGGPKTRQALKDAIANGN
LAKSKQLVTLDRNVPIPLDWEGWRRRDWDGQKLLELFHEFGFRGFAERVRKTLTNSGAKK
NADALETAGLAPAPAPVVEDTNGRGVPGASAQPAKPAKQPKGKAKKPATPGLFDLLMEET
GENAPPAETPTLVEAAIPTDTWNYAGYETVDTEARFEWFLAELKKQKAFVFDLETTGLDP
IHDPIVGFAFCWEKERAYYLPVRAPQEDAALDPSAALAALKPVFEDPKIEKRNHNIKFDQ
IVLAANGVDLAGVAGDSMLAHYLLDPGARVHGLDDLTLDVLEHKNIAIADLIGKGKKQTT
MNTVRVARVRDYACEDADAAFQLATIFEPQLAEKGFRELYDTLEVPLIGVLADMERTGIR
VDVPFLTQLGEQMGAELAGLEIDIHALAGREFNIASLKELQKILFEELKLPVQKRTGIKN
EPSTDQESLERLAALGHELPKKLIAHRKVAKLKGTYVDVLPVMADKTGRIHTSFNQASAE
TGRLSSSDPNLQNIPMRTEQGAQLRKAFIPRDGWTLVTADYSQIELRLLAQFCGDETLKS
AFAEDRDVHTAVAAQIFKVPEADVTKAQRGVAKTVNFGVIYGMSATGLAVRLAIPRKEAE
EFIDAYFARYPKVLEYQQKLLAHAHKTGEVRTLLGRKRILNAAAINPNSRYQGRGQAERE
AINYEIQGSAADLIKRAMLAAQRRLAAQKMQAKMLLTVHDELVFEAPSGEVALLAKLVRE
EMTTAMKLDVPLRVDVAAGPNWLDVEDV
NT seq 2967 nt   +upstreamnt  +downstreamnt
atgtcggacccggtttccgcgggcaacctgtatttgttggacgcccacggactcatcttc
caaatgttcttcggcgtgccgccgatgaacgcacccgacgggcggcccgccaacgccgtc
ttcggggtcacgcgctcgttgatgaacctctacgaccgcggtgccgactacctcattgcc
gcactcgaccacgccgagccgaccttccgcgagaccatcgactcgaactacaaagcgcac
cgcgacccgccgccggacgatctgctgctccaagagccgctcattcagcaggtcatggaa
gcgatgcgggtgccgttcctgatcgcgaaggggtacgaggccgacgacgtgatggcgacg
gtcgcgtctgcggccgctgcgcgcgggctgaacgtgtttctctgcacgtccgacaaggac
tgtcggcaactcgtcaccgacaaggtgaagatgctgaacctccgcaaagattacgaggtt
ctggacgcggccggtattatcgcggattggggcgttcggccggatcaggtggtcgatttc
cagtcgctcgtcggcgattcggtggacaacattccgggtgtgatgggagtgggtccgaaa
acggcggcgaaatggcttcaacagtacggtacgctcgacgaactcatcgcacacgcggac
gaggcgccgggcggtccgaaaacgcgccaggcgctcaaggacgcgatcgccaacggcaac
ctcgcgaagagcaagcagctcgtcacgctcgaccggaacgtaccgatcccgctcgactgg
gaggggtggcgccgacgggactgggacgggcagaagctcctcgaactgttccacgagttc
gggttccgcgggttcgccgagcgcgtgcgcaagactctgaccaacagcggcgccaagaag
aacgccgacgcactcgaaactgcggggcttgcgcccgcaccagcaccggtcgtcgaagat
accaacggaaggggcgttcccggtgcgtccgcacagccggccaagcccgcgaaacagccc
aaaggtaaggcaaagaagccggccacacccgggttgttcgatctgttaatggaagagacc
ggtgagaacgctccgccggccgaaactcccacgctcgttgaagccgcgattcccactgat
acgtggaactacgcgggttacgagactgtagacaccgaagctcggttcgagtggttcctc
gcggagttaaagaagcagaaggcgttcgtcttcgatctggaaacgacggggttggacccg
attcacgacccgattgtggggttcgcgttctgctgggagaaggagcgggcctattacctg
cccgtgcgtgctccgcaagaggacgcggccctcgatccgagtgcggcgctcgccgccctc
aagccggtctttgaagacccgaagatcgagaaacggaaccacaatatcaagttcgaccag
atcgttctggccgcgaacggcgtcgatctcgcaggggtcgcgggcgattccatgctcgcg
cactacctcctcgaccctggggcgcgggttcacggactggacgaccttacgctcgacgtg
ctcgagcacaagaacatcgcgattgccgacctgatcgggaaggggaagaagcaaaccacg
atgaatacggtgcgggtcgcccgcgtccgagattatgcgtgcgaggatgccgacgccgcg
ttccaactcgcgaccatatttgaaccgcaactggcagaaaagggcttccgcgaactctac
gacacgctcgaagtgccgctaatcggcgtactggccgatatggagcggaccggtattcgc
gtggacgtgcccttcctcacgcaactcggcgagcagatgggcgccgaacttgcgggatta
gaaatagacatccacgcactcgccgggcgtgagttcaacatcgcctccctgaaggaactc
cagaagattctcttcgaggaactgaaactaccggttcaaaagcgcacggggatcaagaac
gagccgagtaccgatcaggagtcactcgaacgactggccgcgttggggcacgaactgccc
aagaagctgatcgcgcaccgcaaggtggcgaagctcaagggcacctacgtcgacgtgctc
ccggttatggcggacaagaccgggcgcattcacacgtcgtttaatcaggcgtctgccgag
accgggcggttgagttcgagtgacccgaacctgcaaaacatcccgatgcggacggagcag
ggggcacagctccgtaaagcgttcatcccgcgcgacggctggactctcgttaccgctgac
tattcgcagatcgagttacggcttttagcccagttctgcggcgatgaaacgctgaagtcc
gcgttcgcggaggaccgggacgttcacaccgcggtcgcggcgcaaatcttcaaggtgccg
gaggcggatgtaacaaaggcccaacgcggggtggcgaaaacggtcaatttcggcgtcata
tatggtatgagcgcgaccgggctggccgttcggctcgcgatcccgcgaaaggaggcggaa
gagttcatcgacgcctacttcgcccgctatccaaaggtgctggagtatcagcaaaagctc
ctggctcatgcgcacaaaaccggtgaagtgcgcacactactcgggcgcaaacgcattctg
aatgcggccgcaattaacccgaactcgcgttatcaggggcgcgggcaggcggaacgtgag
gcgatcaactacgagatccagggttcggccgcggacctgattaagagggccatgcttgcg
gcgcagcggcggctcgcggcgcaaaaaatgcaagcgaagatgcttcttaccgttcacgat
gaactcgtgtttgaagcgccgtcgggcgaagttgcgttgctggcgaagctcgttcgcgaa
gaaatgactaccgcaatgaagctggacgtgccgctccgcgtagatgtggccgccggcccg
aactggctggacgtcgaggacgtgtaa

DBGET integrated database retrieval system