Gemmata sp. SH-PL17: VT84_18750
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Entry
VT84_18750 CDS
T04358
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03030
DNA replication
ges03430
Mismatch repair
ges03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VT84_18750 (dnaX_1)
03430 Mismatch repair
VT84_18750 (dnaX_1)
03440 Homologous recombination
VT84_18750 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ges03032
]
VT84_18750 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_18750 (dnaX_1)
Enzymes [BR:
ges01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VT84_18750 (dnaX_1)
DNA replication proteins [BR:
ges03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VT84_18750 (dnaX_1)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VT84_18750 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_5
AAA_22
AAA_30
AAA_16
AAA_14
DUF815
AAA_19
AAA_2
AAA_18
Mg_chelatase
TsaE
T2SSK
Zot
AAA_24
nSTAND3
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AMV26445
UniProt:
A0A142XHL3
LinkDB
All DBs
Position
4346956..4348782
Genome browser
AA seq
608 aa
AA seq
DB search
MSKSKPISAPDPGADAPAYTVVARRYRPQQFAELIGQEHVANALVNALKSGRVAHAYLFT
GARGVGKTSAARILAKALNCMKSDRPTATPCDECDSCRAVMTGDDVDVLEIDGASNNKVE
EVRDLRQNVGFRPARGRYKIYIIDEVHMLSTSAFNALLKTLEEPPEHVKFILATTEVQKI
PITILSRCQRFDFAHVGPAKIFDQLKRIVEREGHLADDDALRLVARRAAGSMRDSQSLLD
QLLASAQGKLTTEQVSAVLGTAADDRVIDLARAVIGGDARAALDLIAAWVDRGLQIGELV
DQLVEYWRALMLVSCGGPEVRELPVSPNQFEAVKTQSQSVSLDTILAGLEVLTATKARMR
GSAHTQVLLEMAVVRLCRLGDLRSLDQLVQALSQPGVQSAVVATGAGTPAPTRAAAPVPV
AAEAAKKNGPLAGALTAKPAENGSPNNGTSTVPLSESTLQDVWNRFYRYAGERYPILAKH
LNSVSSYAISAPNSLVIRFPSSYSESHDTCSAETGSLRLADALKKVTGQTIALRFERDRA
PNSQPLVREAQPSLASRGDVKQLLPSLPLFKKALDLFGAQIRQVDDGFNPFAAPPKEAET
KDGTDEEG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagtcgaagccgatctccgcacccgaccccggtgccgacgcgccggcgtacacg
gtcgtcgcgcggcggtaccggccacagcagttcgcggagttaatcgggcaggagcacgtc
gcgaacgcgctggtgaacgcgctcaagtccgggcgcgtggcgcatgcgtacctcttcacg
ggcgcacgcggggtcggcaaaaccagcgccgcccgcattttggcgaaggcgctcaactgc
atgaagagcgaccgcccgaccgccactccgtgcgacgagtgcgacagttgccgggccgtg
atgaccggtgacgacgtggacgtgctggagatcgacggcgcgagcaacaacaaagtggag
gaagtgcgcgacctgcgccagaacgtcgggttccgccccgcacgcgggcgctacaagatt
tacatcatcgacgaagtccacatgctctccacgtccgcgttcaacgcgctgctgaagacg
ctggaggagccgcccgagcacgtcaagttcatcctcgcgacaacggaagtgcaaaaaata
ccgataacgatcctgtcgcggtgccagcggttcgacttcgcacacgttggaccggccaag
attttcgaccagctcaagcggatcgtggagcgggaagggcacctcgccgatgacgacgcg
ctgcgactcgtcgcccggcgcgcggccgggtcgatgcgcgactcgcaatcgctgctcgac
cagctcctcgcttcggcgcagggcaagctcacgacggagcaagtgagtgccgttttggga
accgcggccgatgatcgcgtgatcgatctggcccgcgccgttattggtggagacgcgcgg
gcggctctcgatctcatcgcggcgtgggtcgatcgcgggcttcagatcggggaacttgtt
gaccagctcgtggaatactggcgcgcactcatgctcgtgagttgcggcgggccagaggtc
cgtgaacttccagtgtcgccgaaccaatttgaggcagtgaagacgcaatctcagagcgtt
tcactcgacactatccttgcgggccttgaggtgctgaccgcgacgaaagcgcgcatgcgc
ggcagtgcgcacacccaagtgctgctcgaaatggctgtggtccggttgtgccggctcggg
gatctccgttctctcgatcaattggtgcaagctctgtcgcaaccgggggtacaatccgct
gtcgttgctacaggagcgggcaccccggccccaacgcgagcggcggcgccggttcctgtg
gcggctgaagccgcaaaaaaaaacggacccctggcgggagcactgacggctaagccggct
gaaaacggttctccgaataacggtacgtccacggttccgctcagcgaatcgacccttcaa
gacgtgtggaatcgcttttaccgctacgccggggaaagatatccgatccttgcaaaacac
ttgaattcagtcagttcatatgcaatttctgcgccaaattctctggtaatccgcttcccc
tcgagttatagtgaatcacacgacacgtgttcggccgagaccggatcgctgcggctcgcg
gacgcgctgaagaaggtgaccggccaaacgattgccttgcggttcgagcgcgatcgcgcc
ccaaactctcagccgctggtccgcgaggcacaaccgtcgttggcgtcgcgcggggacgtg
aagcaattactgcccagtctcccgctgttcaagaaggcgctcgacctgttcggggcacag
attcggcaagtggacgacggcttcaatccctttgctgctccgccgaaggaggcggagacc
aaagacgggaccgacgaggaagggtga
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