Gemmata sp. SH-PL17: VT84_20365
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Entry
VT84_20365 CDS
T04358
Symbol
rluC_1
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ges03009
]
VT84_20365 (rluC_1)
Enzymes [BR:
ges01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VT84_20365 (rluC_1)
Ribosome biogenesis [BR:
ges03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT84_20365 (rluC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AMV26766
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All DBs
Position
complement(4770544..4771671)
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AA seq
375 aa
AA seq
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MPPIQFVVDRREAGQTLAAVLKLRFGIPWARAKRLVEGRHVKVSGQVETDVARRLKLGKR
VELATGTVEMKKTPGGKDGKTPDQQKGIVTGNKGKPGEKRSQAPAPHKTTKTAPKTPERR
RDRVPPAHPLAPSLELDAIVYVDDAVVVVNKPVGLTTMRHKDEADEFGEHGQRFLTKTLA
GMLPVLLGTPDRPVTAVHRLDRDTSGLVVFARTSAAAENLTKQFRKHTTDRRYLALTRGV
PKAARIASVLVRDRGDGRRGSTTDLIAEDGKRAVTHVSVLESWGDFALVGCRLETGRTHQ
VRIHLGEAGAPLCGETVYDRPINGKPRPDESGAKRPMLHATRLGFTHPDTGENVSWEVAP
PRDFGDLLVKLRAGQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gtgccgccgattcagttcgttgtcgatcgccgagaggccgggcagacgctcgccgcggtg
ctcaaattgcggttcggcatcccgtgggcgcgggccaagcgcctcgtcgaggggcggcat
gtcaaagtgagcggccaggtcgagaccgacgtcgcccggcgactgaaactcggtaagcgc
gtggaacttgctacgggtacggtcgagatgaagaagactcccgggggcaaggatggcaag
acgccggatcaacagaagggaatcgtaactgggaataagggcaagccgggggaaaaacgc
tcacaggcccccgcgccacacaagaccactaagaccgcgccgaaaacccccgagcgcaga
cgggaccgagttccccccgcgcacccgttggctccttcactcgaactcgacgcgatcgtt
tacgttgatgatgccgtggtcgtagtgaataagccggtcgggttgacgacgatgcgacac
aaggacgaggccgacgagttcggtgaacacggtcagcggttcctgacgaagacgctcgcc
gggatgctccccgtcttgttaggtactcccgatcggccggtgacggcggtccaccggctc
gaccgcgacacgtcgggcttggtcgtattcgcccgaaccagcgccgcggccgaaaacctc
acgaagcagttccgcaagcacacgaccgaccggcgctacctcgcgctgacccgtggggtg
ccgaaggcggcgcggatcgcgtcggtgcttgtgcgcgaccgcggcgatggtcggcgcggg
agcacaacggacctgatcgcggaagacggcaagcgcgctgtcacgcacgtatcggtgttg
gagtcgtggggcgatttcgctctcgtggggtgccggttggaaacggggcgcacgcaccag
gtgcgcattcacttgggtgaagccggcgcgccgttgtgcggggaaacggtctacgatcgg
ccgatcaacgggaaaccgcgcccagacgagagtggcgcgaagcgcccgatgctgcacgcg
acccgtttggggttcacgcacccagatacgggcgagaatgtatcttgggaagtggcgccg
ccgcgagacttcggggacctgctggtgaaactgcgcgccgggcagtga
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