Gemmata sp. SH-PL17: VT84_21645
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Entry
VT84_21645 CDS
T04358
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_21645 (sbcD)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VT84_21645 (sbcD)
Archaeal homologous recombinant proteins
VT84_21645 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
AMV27021
UniProt:
A0A142XJC7
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Position
complement(5094620..5095852)
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AA seq
410 aa
AA seq
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MRILHTADWHLGDRLGRIDRTDDLRKAVERVADYCKQENVDVLLVAGDLFSELARPDGLR
ETIRHWQSVFSPFLESGGTILTLTGNHDNENFCQTLVSAMSLASPTVGKPGETVPPGRLY
LAADPTFIRLEDRMRGFPVQFVLMPYPTPHRFLRGETGLKYGSPEEKNALLVSAWADALR
EIRAHPKYDLKAPSVLGAHVHVHGSTIGPSLFRITVEEDVVVEGAELPNQFDYVALGHIH
KPQWLGAEHMRYCGSIERLDLGEQADQKGVILVDIGPDGRNGEPVVLPLQATPIYEVVVL
DPAEDIPRLRAEYPSANNDLVNLQIRYTAGKDQLEDVLRDLDKIFPRWYARDWKETGALG
PTLVSPATGGGKGFGETVHEYLTQELIQHDEAERDAILKIADGLLKEMES
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcctccacaccgcggactggcacctcggcgaccggctcggccggatcgaccga
accgacgacctgcgtaaagcggtcgagcgcgttgccgattactgcaagcaagaaaacgtc
gacgtgctgctcgtcgcgggcgacctcttcagcgagttggcccgcccggacgggttgcgc
gaaaccatccgccactggcagtccgtcttcagcccgttcctcgaatccggcggcacgatc
ctcacactcaccggcaaccacgacaacgagaacttctgccaaacgctcgtgagcgcgatg
tcgctcgcgtcgcccacggtcgggaagccgggcgaaacggtgccgccgggccggttgtac
ctcgcggccgaccccacgttcatccggctcgaagaccgaatgcgcgggttcccggtccag
ttcgtactgatgccgtaccccaccccgcaccgattcctccggggcgaaaccggtctgaaa
tacggcagtccggaagaaaagaacgcgctactcgtttccgcgtgggccgacgcgctgcga
gagatccgcgcgcacccgaagtacgacctcaaagccccctcggtgctcggcgcgcatgtc
cacgttcacggctccaccatcggaccgagcctgttccgcatcaccgtggaagaggacgtt
gttgttgagggcgcggaactaccgaaccagttcgattacgtggcactgggccacattcac
aaaccgcagtggctcggcgcggagcacatgcggtattgcggtagtatcgagcgtctggac
ctgggcgaacaggccgaccaaaaaggcgtcattttggtcgacatcggcccggacgggcgg
aacggagagccggtcgtgctcccgctccaggcgacgccgatttacgaggtcgtggtgctc
gacccggcggaagacattccgcgcctgagagcggagtacccgagcgcgaacaacgatctc
gtgaacctccagatccgctacaccgcgggtaaggaccagctcgaagacgtgctccgggac
ttggacaagatcttcccgcgctggtacgcacgcgactggaaggagaccggcgcgctgggt
ccgacactggtaagccccgcaacgggcggcggaaaggggttcggtgaaacggtccacgag
tacctgacgcaagagctgatccaacacgacgaggccgaacgcgacgcgatcctgaaaatc
gccgacggattgctgaaggaaatggagagctag
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