Gemmata sp. SH-PL17: VT84_21715
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Entry
VT84_21715 CDS
T04358
Name
(GenBank) Cadherin domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ges02000
]
VT84_21715
Transporters [BR:
ges02000
]
Other transporters
Pores ion channels [TC:
1
]
VT84_21715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Big_9
FG-GAP
FG-GAP_3
Cadherin_CELSR2_9th
Cadherin_4
TcdB_toxin_midN
PepSY
HAP2-GCS1
Motif
Other DBs
NCBI-ProteinID:
AMV27035
LinkDB
All DBs
Position
5113925..5116852
Genome browser
AA seq
975 aa
AA seq
DB search
MQLARWMTRLLAKPARSSRSTSPAPRGKFWTEVLEDRINLANFATGTAVGEAPIVRVFDA
ATQQPVAALNAYTGGYTGGVNVAMGDVTGDGVADIITGTATTASHVKVFDGATFQEVRSF
LAFPGFPGGINVAAGDINGDGKADIVASVANGGPPHVKAFSGANGAELASFFAYDQGFTG
GVRVAVGDVDGDGKADIVTGSGPGAGGHVKAFSGANGSVLRSFLAYPGFNGGVNVAVGDI
DGDGKADIVTGSGPGVSPHVKAFSGANGNQIASFFAYDQNFKGGVLVGVNADGDIATGAS
GTAHLKTFDGVTHAELSSAFSSRPVTAIAAPSNPNVAPVITSGATASVAENQTAAYTTAA
TDANTPAQTLTYSITGGADAAKFAINAATGVVTFLAAPDAEAPTDVGANNVYEITVQVSD
GFLTATKNVSITVTGVSEFAPVITSNGGGTIAAINAAENQTAVTTVSSTDADVGTGSART
YSISGPDAAKFAINATTGVLTFLAAPNFESPTDVGGNNVYDVTVTVSDGTLTDVQDLSIT
VTDANDAPVISSNGGGETAAVSAAENQTAVTTVTATDEDAGATRTYSISGGADAVKFSIN
ASTGVLTFIAPPDFETPTDAGANNVYDVIVQVSDGTATDTQTISVTVTGLNDNNPVITSN
GGGATAAVNAAENQTVVTTVTATDTDLPAQTLTYSISGGADAAKFTINATTGVLTFVTAP
DFETPTDANTDNVYDVIVQVSDGTLTDTQTISVTVTGVNDNNPVITSNGGGATAAVNAAE
NQTAVTTVTATDTDLPGDTLTYTIIGGADAAKFSINATTGVLTFVAAPDFETPTDAGANN
VYDVIVRVSDGTLTDVQAIAVTVTNVNEAPVITSNGGGANAAINAAENQTAVTTVTATDV
DAGTTLTYSITGGADMGLFTINSSTGVLTFLAAPDFEAPGDTGTDNVYDLVVTVSDGTLT
DTQTIAVTVTDVGGA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttgcacgctggatgacccgcttgctcgccaagcccgcccgttcgtcccggagc
acctctcccgccccgcgcggtaagttctggaccgaggtgctggaagaccggatcaacctg
gccaacttcgccaccgggacggccgtcggcgaggccccgatcgtgcgcgtgttcgacgcg
gccacgcaacagccggtcgcggcgctgaatgcgtacaccggcgggtacaccggcggggtg
aacgtggcgatgggcgacgtgaccggggacggggtggccgatatcatcaccggcaccgcg
accacggcctcgcacgtcaaggtgttcgacggcgcgacgttccaggaagtgcgcagcttc
ctggcgttccccgggttccccggcggcatcaacgtggccgcgggtgatatcaacggggac
ggcaaggccgacatcgtcgcgtcggtggcgaacggcggcccgccgcacgtgaaggcgttc
agcggcgccaacggggccgagctcgcgagcttcttcgcctacgaccaggggttcacgggc
ggggtacgggtcgcggtgggcgacgtcgacggggacggtaaggccgacatcgtcaccggg
tccgggccgggcgccggcgggcacgtgaaggcgttcagcggcgccaacgggagcgtgctc
cgcagcttcctcgcgtaccccgggttcaacggcggggtgaacgtggccgttggggacatc
gacggggacggtaaggccgacatcgtgaccggctccggaccgggcgtctccccgcacgtg
aaggcgttcagcggggccaacgggaaccagatcgcgagcttcttcgcctacgaccagaac
ttcaagggcggggttctggtgggcgtcaacgcggacggggacatcgcgacgggtgcctcc
ggaaccgcgcacctgaagaccttcgacggtgtgacgcacgcggagctgagcagcgcgttt
tccagccggccggtgaccgcgatcgccgcgccgtccaaccccaacgtcgccccggtcatt
acctccggcgcaacggcgagcgtcgcggaaaaccagaccgcggcctacaccaccgccgcg
accgacgcgaatactcccgcacaaacgctgacctacagcatcaccggcggggccgatgcc
gcgaagttcgccatcaacgccgccaccggtgtggtgaccttcctcgccgcccccgacgcc
gaggccccgaccgatgtgggcgccaacaacgtctacgagatcaccgttcaggtgtccgac
gggttcctcaccgcgacgaagaacgtctcgatcacggtcaccggggtgagcgagttcgcg
ccggtcatcacgagcaacggcggcggcacgatcgcggccatcaacgcggccgagaaccag
accgccgtcaccaccgtctcctccaccgacgcggacgtgggcaccggcagcgctcgcacg
tacagcatcagcggccccgacgccgcgaagttcgccatcaacgctaccaccggcgtgctg
acgttcctcgccgccccgaacttcgagagcccgaccgacgtgggcggtaacaacgtctac
gacgtgaccgtgaccgtctccgacggtaccctcaccgacgtgcaagacctcagcatcacc
gtcaccgacgccaacgacgcgcccgtcatctcgagtaacggcggcggggaaacggccgca
gtgagcgcggccgagaaccagaccgctgtcaccaccgttaccgctaccgacgaagacgcc
ggcgccacgcgaacctactccattagcgggggcgcggacgccgtgaagttcagcatcaat
gcctccaccggcgtgctgaccttcatcgcccccccggatttcgagaccccgaccgacgcg
ggtgccaacaacgtctacgacgtcatcgtgcaagtgtccgacggcaccgcgactgacacc
cagaccatctcggtcaccgtcaccgggctcaacgacaacaaccccgtcatcacgagcaac
gggggcggggcaacggcagcggtgaacgcggccgagaaccagaccgtcgttaccactgtc
accgccaccgacaccgacctgccggcgcaaacgctgacgtactcgatctccggcggcgcg
gacgcggcgaagttcaccattaacgccaccaccggcgtgctcaccttcgtcactgcaccc
gacttcgagaccccgaccgacgcaaacaccgataacgtctacgacgtcatcgtgcaggtg
tccgacggcaccctcaccgacacccagaccatctcggtcaccgtcaccggggtcaacgac
aacaaccccgtcatcacgagcaacgggggcggggcaacggcagcggtgaacgcggccgag
aaccagaccgccgtcaccactgtcaccgctaccgacaccgacctgccgggggacacactg
acgtacaccatcatcggtggcgcggacgcggcgaagttcagcatcaacgccaccaccggc
gtgctcaccttcgtcgccgcaccggacttcgagaccccgaccgacgcgggtgccaacaac
gtctatgacgtcatcgtgcgcgtgtccgacggcaccctcaccgacgtgcaagcgatcgcg
gtcacggtgaccaacgtgaacgaagccccggtcatcacgagcaacgggggcggagcgaac
gcggccatcaacgcggccgagaaccaaaccgccgttaccaccgtcaccgccaccgacgtc
gacgccggcaccacgctgacgtactccatcaccggcggcgcggacatgggcctgttcacc
attaacagctcgaccggcgtactgacgttcctcgccgcccccgacttcgaggccccgggg
gacacgggcacggacaacgtctacgatttggtcgtcaccgtgtccgatggcaccctgacc
gacacccaaaccatcgccgtcaccgttaccgacgtcggcggcgcctga
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