Gemmata sp. SH-PL17: VT84_21870
Help
Entry
VT84_21870 CDS
T04358
Symbol
nfo_2
Name
(GenBank) Endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT84_21870 (nfo_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_21870 (nfo_2)
Enzymes [BR:
ges01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
VT84_21870 (nfo_2)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
VT84_21870 (nfo_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Peptidase_S9
Motif
Other DBs
NCBI-ProteinID:
AMV27065
UniProt:
A0A142XJE8
LinkDB
All DBs
Position
complement(5162875..5163750)
Genome browser
AA seq
291 aa
AA seq
DB search
MPLFGAHLSISRGLHNAISAASALGCDTVQIFTKNASKWTAELLSPEAITQFRRAASASR
LKHLTAHDSYLINLASPDTSVYAKSVEAFVDELERAEALGLDYLVTHPGAHTGSGEDAGL
ARVIEGFEEVHARCAGFNVRVLIETTAGQGTSLGHRFEHIATILDRAKCADRMGVCLDTC
HIFAAGYPLGSDSDYRSTFQQFDDLVGLDRLKLFHVNDSAKALGSRVDRHAGIGLGEIGP
EAFRRLVTDPRFLDRPMILETPKKNDDGDEMDAVNLALLRKFAANGIARAG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgccacttttcggcgctcacctttcgatcagtcgcgggctgcacaacgcgatctccgca
gcatccgcgctcgggtgcgataccgtccagatcttcaccaaaaatgccagcaaatggacc
gcagaactgctttctccggaagccatcactcagtttcgccgggcggctagtgcgtcacgc
ctcaagcacctgactgcgcacgactcgtacctcatcaacctcgcgtcgccggatacttcg
gtctacgcgaaatcggtcgaagcgttcgtggatgagctggaacgtgccgaagcgctcggg
ctggactacctcgtcacgcacccgggggcacacaccggcagtggtgaagacgcagggctg
gctcgtgtgatcgaagggttcgaggaggttcacgcgcgctgcgccggtttcaacgtgcgc
gtgttgatcgaaacgactgcgggacaaggaacgtcgctcgggcaccggttcgagcacatc
gccacgatcctcgatcgcgcgaagtgcgccgaccgtatgggcgtgtgcctcgatacgtgc
cacatcttcgcggccgggtacccgctcggctcagattcggattaccggagcacgtttcag
cagttcgacgacctcgtcggccttgatcgactgaagttgtttcacgtcaacgatagcgcg
aaggcactgggcagtcgcgtggaccggcacgcgggtatcgggttgggggagatcggcccc
gaagcgttccgccggctcgtgaccgacccgcggttcctcgatcgccccatgatcctcgaa
acgcccaagaaaaacgatgacggtgacgagatggacgcagtcaacctcgcgctactgcgc
aagttcgccgcgaacggtatcgcgcgtgccgggtga
DBGET
integrated database retrieval system
