Gemmata sp. SH-PL17: VT84_22200
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Entry
VT84_22200 CDS
T04358
Symbol
carB
Name
(GenBank) Carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00220
Arginine biosynthesis
ges00240
Pyrimidine metabolism
ges00250
Alanine, aspartate and glutamate metabolism
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01240
Biosynthesis of cofactors
Module
ges_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
VT84_22200 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
VT84_22200 (carB)
00220 Arginine biosynthesis
VT84_22200 (carB)
Enzymes [BR:
ges01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
VT84_22200 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
RimK
ATP-grasp_2
ATP-grasp_5
Methyltransf_3
Isochorismatase
Motif
Other DBs
NCBI-ProteinID:
AMV27130
UniProt:
A0A142XKY6
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Position
complement(5249099..5252416)
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AA seq
1105 aa
AA seq
DB search
MPKRTDIKKILLIGSGPIIIGQACEFDYSGTQACKALREEGYSVVLVNSNPATIMTDPET
ADRTYIEPITWEVVEKIIVAERPDALLPTLGGQTALNTAMDLFKKGVLAKHGVEMIGANA
DVIDKAEDRQRFKDAMLKIGVSVPKSVVVHSLEEAMRAVEEVGLPCVLRPSFTMGGTGGG
IAYNRDEYRDLITHGLQLSPTTEVLVEESVIGWKEYELEVMRDRADNVVIICSIENLDPM
GVHTGDSITVAPAQTLSDKEYQRMRDKAKDIIREIGVETGGSNIQFAINPADGRMIAIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELRNDITRETPACFEPTIDYVVTKVPR
FAFEKFPEANPTLTTQMKSVGETMAIGRTFKESLQKALRGLEVNRFGLGCDKRDRWGTAN
PPAREEITFKLSSPNAERVWYLRYAFLAGMSLDEIHQRTKIDPWFLRGVEDLVNIEHELR
AVGSLDKVTPELMLKAKQSGFIDRQLAHIWNVAEAEVRKLRKSFGIEAVFKSVDTCAAEF
EAYTPYYYSTYEPGARVQQSGQPVYFSPGEDEVRPSSGKSRIMILGGGPNRIGQGIEFDY
CCVQAAFALRDNGYEVIMVNSNPETVSTDYDTSDHLFFEPLTPEDVLNINDKMKPEGVIV
QFGGQTPLNLATPLQDAGVPIIGTSVDSIDVAENRERFAKLVNEIGLLQPANGTAVDESQ
ALRVARRIGFPILVRPSFVLGGRDMKIIYNEDELTAYIRRVEPDLSRDRPVLIDQFLENA
TEVDVDCLSDGNRTVIGGVMQHIEEAGIHSGDSACVIPPYSLPADVISEIKVQARKLATA
LNVKGLMNIQFAVAGIRAGGIVTDKPKVYILEANPRASRTVPFVSKATGVPLARLAALVM
VGKTLDELGVKDEVIPTHYSIKESVFPFNKFPGVDIILGPEMKSTGEVMGIDDSMPMAFA
KAQLAASSRLPEGGTVFISVANRDKDAVLPIARGFAEMGFKVIATRGTAQFLRERGVPVE
DVPKIAEGRPNLLDHMKNGKVQLVINTPTGRGSSTDESKIRAEAVASRVTAITTLSAAQA
AVEACRALKQQQLTVTALQDRFPKQ
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgtaccgacatcaagaagatcctgctcatcggctccggccccatcatcatt
ggccaggcgtgcgagttcgattactcgggaacgcaggcctgcaaagcacttcgcgaagag
ggctattcggtcgtcctggtgaactccaacccggcgaccatcatgaccgacccggagacg
gccgaccgcacgtacatcgagccgatcacctgggaagttgttgagaagatcatcgtcgcg
gagcgccccgacgcgctcctgcccaccctcggggggcagaccgcgctcaacaccgcgatg
gacctgttcaagaagggcgtgctggcgaagcacggcgtcgagatgatcggcgccaacgcg
gacgtgatcgacaaggccgaggaccggcagcggttcaaggacgcgatgctgaagatcggc
gtctccgtgccgaaatcggtcgtggttcactcgctcgaagaggcgatgcgcgcggtcgaa
gaagtggggctgccgtgcgtgctgcgcccgagcttcacgatgggcggcaccggcggcggg
atcgcgtacaaccgcgacgagtaccgcgacctcatcacccacgggctgcagctctcgccc
accacggaagttctcgtcgaagagtccgtgatcggctggaaagagtacgagctggaggtg
atgcgcgaccgggccgacaacgtcgtcatcatctgctccatcgagaacctcgacccgatg
ggggtccacaccggcgacagcatcacggtcgcccccgcgcaaacgctctccgacaaggag
taccagcggatgcgcgacaaggcgaaggacatcatccgcgagatcggggtcgaaaccggc
ggcagcaacattcagttcgcgatcaacccggccgacgggcgcatgatcgcgattgaaatg
aacccgcgcgtgtcacgcagtagcgccctcgcgtcgaaggccaccgggttcccgatcgcg
aagatcgcggccaaactcgcggtcggctacacgctcgatgaactccgaaacgacatcacc
cgcgaaacgccggcctgcttcgagccgaccatcgactatgtcgtgacgaaagttcctcga
ttcgcgttcgagaagttcccggaagcgaacccgacgctcaccacgcagatgaagagcgtc
ggcgaaacgatggcgatcggccgcacgttcaaggagtctctccagaaagcgctccgcggt
ctggaagtcaaccgcttcggcctcggctgcgacaagcgcgaccggtggggcaccgcgaac
ccgcccgcgcgcgaggagatcacgttcaagctctccagccccaatgcggagcgggtctgg
tacctgcggtacgccttcctcgccgggatgtcgctcgacgagatccaccagcgcacgaag
atcgatccctggttccttcgcggggtcgaggatctcgtcaacatcgaacacgaactgcgt
gcggtcggctcgctcgataaggtcacgcccgagctgatgctgaaggccaagcagagcggg
ttcatcgaccggcaactggcgcacatctggaacgtcgcggaagccgaagttcggaagctc
cgcaagagcttcgggatcgaagcggtgttcaagagcgtggacacctgcgcggccgagttc
gaggcgtacacgccgtactactactcgacctacgagccaggcgcgcgggtccagcagtcg
ggccaacccgtgtacttctccccgggcgaagacgaggtccgcccgtccagcgggaagtcg
cggatcatgatcctcggcggcgggccgaaccggatcggtcagggtatcgagttcgactac
tgctgcgtgcaggccgcgttcgcactgcgcgacaacggctacgaagtcatcatggtgaac
tcgaacccggaaacggtgagcaccgactacgacacgtccgaccacttgttcttcgagccg
cttacgcccgaggacgtgctcaacatcaacgacaagatgaagcccgagggcgtgatcgtg
cagttcggcgggcaaacgccgctgaacctcgccacgccacttcaggacgcgggcgtgccc
atcatcggcacgagcgtggacagcatcgacgtggccgagaaccgcgagcggttcgccaaa
ctcgtcaacgaaatcgggctgctccagcctgcgaacggcaccgcggtggacgaatcgcaa
gctctgcgggtcgcgcgtcggatcgggttcccgatcctcgtgcgcccgagcttcgtgctc
ggcgggcgcgacatgaagatcatctacaacgaggacgaactaaccgcgtacattcgccgc
gtcgaacccgatttgtcgcgcgaccgcccggtactgatcgaccaattccttgagaacgcg
actgaagtcgatgtggactgcctgagcgacgggaaccggaccgtaatcggcggtgtcatg
cagcacatcgaggaggccggtatccactccggcgactccgcgtgcgtgatcccgccgtac
agtttgcccgcggacgtcatttcggagatcaaagttcaggcgcgcaaactggccacggcg
ctgaacgtaaaagggttgatgaacatccagttcgcggtcgccgggatccgcgcgggcggg
atcgtcaccgataagcccaaggtttacatcctcgaagcgaacccgcgtgcgagccgaaca
gttcccttcgtgtcgaaggcgaccggggtgccgctcgctcgactcgctgcgctcgtgatg
gtgggcaagacactcgacgagttgggcgtgaaggacgaggtgatcccaacgcactactcg
atcaaagagagtgtgttcccgttcaacaagttccccggcgtggacatcatcctcgggccg
gaaatgaagtccaccggcgaagtcatggggatcgatgactcgatgccgatggcgttcgcg
aaggcgcaactggctgccagttcgcggttgcccgagggcgggacggtgttcatctccgtc
gcgaaccgcgacaaggacgcggtgctcccgatcgcacgcgggttcgccgagatgggcttc
aaggtgatcgcgacgcgcgggaccgcacagttcttgcgcgaacgtggtgtgccggtggaa
gacgttccgaagatcgctgaggggcgcccgaacctgctcgaccacatgaagaacgggaag
gtgcagttggtcatcaacacgccgaccggtcgtgggagttccaccgacgagtcgaagatc
cgggccgaagcggtcgccagccgcgtgaccgcgatcaccacgctgtccgctgcacaagcc
gccgttgaagcgtgtcgggcactcaaacagcaacaactgaccgtgaccgcacttcaggac
cggttcccgaagcaataa
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