Gemmata sp. SH-PL17: VT84_22375
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Entry
VT84_22375 CDS
T04358
Symbol
mutS_2
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VT84_22375 (mutS_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_22375 (mutS_2)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
VT84_22375 (mutS_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AMV27165
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Position
5294922..5297543
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AA seq
873 aa
AA seq
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MTFDLETFDPDAAMSRMMQQYRDAKTQHPGMLVLFRNGDFYELFEDDAELGSRVLGITLT
KRDGSIPMAGVPVHKLEHYLGLLLRAGHRVAVCEQMEEPDPKKKIIPREVNRIVTPGTIT
DDGLLDPRAPNYLVALVPAAKAGVYGIAWVDLSTGYFSAADVPTPKLSDELSRLNAVECL
FADALTNAVAQAAGMHLPRSRVARPDWTFDPSTALAALKTHFAVSTFTGFGFEDAQPCLI
AAGAVIIYLQETLKASLQHIRRLRPHRPDALLALDEVTRRSLELTRTLRDNQRDGSLLSV
LDRTVTPMGARLLHDSVLAPLTDRPAINARLDAVEELLKDHALRRAVREHLEACSDIQRL
TTRVSTAKAGPRDLSAIARTLRKLPAVKAKLAGRRSPLLQELEKRLELCPDIRELLDKAI
EDDPPHIAKEGGVIRAGFSAGLDELRALTTDGKNWIARYQAQEITRTGIGSLKVGYNEID
GYYLEITNANETKTPAEYKHQKTLKNAKRYYTPALREYEEKVVTAQDKSRALELQLFLTL
RDQVAAQTPRLLNAAEVLAALDMLSALAELAAARNYVRPVLVDEPILDVRDGRHPVLDQI
LPPGTFVPNDAAFGPDDGTFWLVTGPNMAGKSTFLRQVALITLMAHMGSLVPAKSATIGM
TDRIFTRVGASDELSRGQSTFMVEMTEAANILNNATPRSLVILDEIGRGTATYDGVSLAW
AMTEYLHDAIGCRSLFATHYHELAQLATALPRLRNYNVLVRELADEIVFLHKIAPGNAER
SYGIHVARLAGVPNAVLKRATAVLSSLEKQHELPGVSTPAVVTAPVTTSAPVVSGELPPR
KTNVVQPPEAPRRKPKPQPSGPSLFGEGEDVPF
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtttgacctcgagactttcgacccggacgcagccatgtcccgcatgatgcagcag
taccgcgacgcgaagacccagcacccgggaatgcttgtcctgttccgtaacggcgacttc
tacgaactcttcgaggacgacgcggaactcggctcgcgcgtactcggcatcacgctcacc
aagcgcgacggatcgatcccgatggccggggttcctgtccacaaactcgaacactacctc
ggacttttgctccgcgccgggcaccgcgtggcagtgtgcgagcagatggaagagccagac
ccgaagaagaaaatcatcccgcgtgaggtgaaccggatcgtcaccccgggcacgatcacc
gacgacgggctgctcgacccgcgcgccccgaactacctcgtcgcgctcgtgcccgcggcg
aaggccggcgtctacgggatcgcgtgggtcgacctatccaccgggtacttctccgcagcc
gacgtccccactcccaaactgtccgacgagctctcgcggctcaacgcggtcgagtgcctg
ttcgcagacgctctcacgaacgccgtggcgcaggccgccgggatgcacctgccgcgcagt
cgcgtggcccggcccgactggaccttcgacccctcgaccgcactcgccgcgctgaagacc
cacttcgcggtgagcacgttcactgggttcgggttcgaggacgcgcagccgtgccttatc
gcggccggcgcggtcatcatttacctgcaagagacgctgaaagcgagcctccagcacatc
cgccgactccggccgcaccgcccggacgcgctcctcgcactcgacgaagtcacgcggcgc
agcctcgaactcacgcgcacactgcgcgacaaccagcgcgacgggtcgcttctctcggtg
ctcgaccgcaccgtgaccccgatgggcgcccgactgctccacgacagcgtgctcgcgcca
ctcaccgaccgcccagccatcaacgcgcggctcgatgctgtcgaagaactgctgaaggat
cacgcgctgcgccgggcggtgcgcgagcacctcgaagcgtgctccgacatccagcgcctc
accacgcgcgtctccaccgcgaaggccggtccccgcgacctgtccgcgatcgcccgcacg
ctccgcaaactgcccgcggtgaaagcgaaactcgccgggcgccggtccccgctcctgcaa
gagctggaaaagcgcctcgaactgtgcccggacatccgcgaactgctcgacaaggccatc
gaagacgacccaccgcacatcgcgaaggagggcggcgtcattcgcgcagggttcagcgcg
gggctggacgagttgcgcgcgctcaccaccgacgggaagaactggatcgcgcgctatcag
gcccaggagatcacgcgcaccgggatcgggagcctcaaggtcgggtacaacgagatcgac
ggttactacctcgaaatcactaacgccaacgaaaccaagacccccgccgagtacaagcac
cagaagacgctcaagaacgcgaagcgctactacacgcccgcgctgcgcgagtacgaagaa
aaggtcgtcaccgcgcaggacaagagccgcgctctggaactgcaactcttcctcacgctc
cgggatcaggtcgcggcccaaacgccgcgcctgttgaacgccgcggaagtgctcgcagcg
ctcgacatgctctccgcgctggcggaactcgcggcggcccgcaactacgtccgcccggtg
ctcgtcgacgagccgattctggacgtccgcgacggccggcacccggtactcgatcagatc
ctgccgccgggcacgttcgtccccaacgacgccgcgttcggtcccgacgacggcacgttc
tggctcgtcactgggccgaatatggccggcaagagcacgttcctgcgccaagtcgcgctc
attaccctcatggcgcacatggggagcttggtccccgcgaagagcgcgacgatcggcatg
acggaccgcatcttcacccgcgtcggcgcgagcgacgagctgagccgcgggcaatcgacg
ttcatggtggaaatgaccgaggccgcgaacatcctgaacaacgcgaccccgcgcagcctc
gtgattctggacgaaatcggccgcggtaccgccacctacgacggcgtgtcgctcgcgtgg
gcgatgacggaatacctgcacgacgcgatcgggtgccggtcactgttcgcgacgcactac
cacgaactggcgcaactggcgaccgccctgccccggttgcggaactacaacgtgctggtg
cgcgaactggccgacgaaatcgtgttcctgcacaagatcgcaccgggcaacgcggagcgc
agttacggcatccacgtcgcgcggctcgcgggtgttccgaacgccgtactgaagcgcgcg
accgcggtgctcagttcgctagaaaaacaacacgaactgcccggtgtttcgacgcccgcc
gtcgtcaccgccccagtcactacgagcgcacccgttgtgtctggagaactccccccacgg
aaaacaaacgtggttcagccgccggaagccccgcggcgcaaacccaagccccaaccgagc
ggcccgagccttttcggagaaggtgaggacgtcccgttctga
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