Gemmata sp. SH-PL17: VT84_22720
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Entry
VT84_22720 CDS
T04358
Symbol
ykfA
Name
(GenBank) putative murein peptide carboxypeptidase
KO
K01297
muramoyltetrapeptide carboxypeptidase [EC:
3.4.17.13
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ges01002
]
VT84_22720 (ykfA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ges01011
]
VT84_22720 (ykfA)
Enzymes [BR:
ges01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.13 muramoyltetrapeptide carboxypeptidase
VT84_22720 (ykfA)
Peptidases and inhibitors [BR:
ges01002
]
Serine peptidases
Family S66
VT84_22720 (ykfA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ges01011
]
Precursor biosynthesis
Carboxypeptidase
VT84_22720 (ykfA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S66
Peptidase_S66C
Motif
Other DBs
NCBI-ProteinID:
AMV27233
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Position
complement(5377453..5378517)
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AA seq
354 aa
AA seq
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MIAPLIRTLPVLALVAIAGSAAFPIAPPTVSASERAEWIRPAALRVGDTIAFVAPAGPAD
AEKVAKAKERFEKMGFKVKVPPTLTARKDRYLAGSDEDRAAEFNAAIKDKTVQAVFSVKG
GYGLTRILDRIDYTAIRENPKIIVGFSDLTALHLAVAKKCRVITFHAPMPQYGLYRDDEG
FGYSSEVFWRTVRADLYPKGENGYAVALPQNGPKPQRLVAGKAKGRLVGGNLTLVGATMG
TPYEIEAEGNILVLEDTGEKAYRIDRVLSQLKLAGLLDKFAGFVLGTFDGSDEKELDTVI
REYFGNRKVPVITNFPIGHTPFNATLPHGGLIEIDADALTVRVLENPVALDAKR
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgattgcccccctgatccgcacattgccggtcctggctctcgttgcgattgccggttct
gcggcgttcccaattgcgcctccaacggtgtccgcgtccgagcgcgcggaatggattcgt
ccggcggctctccgtgtgggcgacacgatcgcgtttgtggcccctgcgggtccggcggac
gccgagaaggtcgcaaaggcgaaggaacggttcgagaaaatggggttcaaggtgaaagtc
cccccaactcttaccgcacgcaaggatcggtacttggccggctccgacgaggaccgagcc
gcggagttcaacgcggcaatcaaggacaaaacggttcaggctgtgttctcggtgaagggc
gggtacggtttgacgcgcatcctggaccgcatcgattacaccgcgattcgcgagaacccg
aagatcatcgtcgggttctcggacctgaccgcgcttcacctcgcggtcgcgaaaaagtgt
cgggtgatcacgttccacgccccgatgccgcagtacggcctgtaccgcgacgacgagggg
ttcgggtactcgtccgaggtgttctggcggaccgtgcgcgcggacctgtacccgaagggc
gagaacgggtacgccgttgcgctgccccaaaacgggccgaagccgcagcgccttgtggcc
ggcaaagcgaagggccgactggtgggcggtaacctgacactggtcggcgcgacgatgggc
accccctacgagatcgaagcggagggtaacatcctggtgctcgaagacacgggcgagaag
gcgtaccgcattgaccgggtgctgtcccagctgaagttggccgggttactcgacaagttc
gccgggttcgttttgggaacgttcgacggatcggacgagaaggagctggataccgtgatc
cgcgaatacttcgggaaccggaaagtgccggtgattaccaacttcccgatcggccacacg
ccattcaatgcgaccctcccgcacggcgggctgatcgagatcgacgcggacgcactgacg
gtccgtgtgctcgaaaatccagttgctttggacgcgaaacggtaa
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