Gemmata sp. SH-PL17: VT84_25385
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Entry
VT84_25385 CDS
T04358
Symbol
sigE_44
Name
(GenBank) ECF RNA polymerase sigma factor SigE
Organism
ges
Gemmata sp. SH-PL17
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
NBCH_WD40
Nbas_N
Cytochrom_D1
Ge1_WD40
HTH_28
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AMV27760
UniProt:
A0A142XMM8
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Position
5965110..5968460
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AA seq
1116 aa
AA seq
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MSVTATPAFAEVMRQIAGGLRPDRVRDADLLADFVTDQNTGFADLVARHGPLVWGVCRRG
LTDPNDAEDAFQATFLALARQARSLADRVSGHETLAGWLHLTARRITHNVRRARTRRCEH
ERRAAAERETQADLVVEPGALGSVLDEELARLPARFRETIVLCYFQGKTHADAARQLGCP
VGSVSSRLARGCELLRDALARRGVTLSIGLMTVAVAVAGAGGHAGAALPPGLVQSTITAA
RAFAVGGPATTEPGRLALGVVQAKSGLRGKISGLVVVAALGMTLAAAMVSQKPVHADGPT
AANPTTAPETQPRTDSSGDPLPEGAVARLGTLRFRTGQMGTAASVAFGPDGKQLISAHGT
DVLFVWEPASGRELRRLDAPQICSGVSATPNGRRMIAVGHAEVWAWDLAANQPLVLWKTK
IGRLIRANAEISPDGRWVAVGGETKGNVVLLDAATGDEVRTLSVGGSGFAFSSDSKLLAV
WAKAPSLNAGTKTDVTVWNVADGKLRYTLPFANTTVTSVAFAPDGKTVATVAEDRRLQLW
EADSGKAQSKLAEDADPHASVGFVKDGTLVEASAGRIRFWNPITGKQSKPAIKTTDTSDV
YRLSADGTQLAGAGLFGVSLHEVASGREIGTTAGMPDGLVHSVTFTPDSSAMVMAVYSES
AGAALHLWDAKDGRLRRRTEVGPRQIVWGVDVASDGTVSAACVPLYQTPQPPTRIVTWDA
DLARVRATFSLPTGVRCGAASPDNRLIAISTGERVILCDRTTGKEVRTLPGKCEATSLVF
SADGSCLGALDPAAKRVTVWSLADKRDKPWVWSPAPVMGKVADIRAPLALAPDGRMFALN
ATGMHGIVSVIETATGTELWHADARLSGLPAQEFAFAPDGRTLAAAGTDGTVRVWEVASG
GERYRFAGHRAGVFSVAYSPDSRRLASASYDSTALVWDVATLPRGTSTGKAAVGDPWLVL
AGQDTAAAARAIATLTDAPDTAIPLLRTKLTPPPAAKPEQIRQWLTDLGADDFKARETAS
RELSLRGDLVLPELRRALTNADVAEVRSRLEQLINRLGAQSPDRRAVIRGIEALERMGTN
PDSQRLLRELAEAPAESVLGREARAAYRRLTAPPPQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaccgccacacccgccttcgcagaggtcatgcgccagatcgcgggcgggctg
cgcccggaccgagttcgggacgcggacctgctcgcggacttcgtgaccgaccaaaacacc
gggttcgccgacctcgttgcccggcacggtccgctggtgtggggcgtgtgccgccggggg
ctgaccgacccgaacgacgccgaggatgcgttccaggccacgtttctcgcactggctcgc
caggcccggagcctcgccgatcgcgtgagtgggcacgaaactctggccggatggctgcat
ctgacggcccggcggatcactcacaacgtgcgtcgagcgagaacgaggcggtgtgaacac
gagcgccgggccgcggccgagcgcgagacacaagccgacctcgttgtggaaccgggcgcc
ctgggttcggtgctggacgaagaactggcccgtctgcccgcgcggttccgcgaaacgatc
gttctgtgttacttccagggaaaaacccacgcggacgcggcccggcaactgggctgcccg
gtcggttccgtatcgagccgcctggcccgcgggtgcgagttactgcgcgacgccctggcg
cgtcggggcgtcactctcagcatcgggctcatgacagtggccgttgcggtagcgggtgcg
ggcggacacgcgggcgcggctcttccgcccgggttggtgcagtccacaatcactgcagct
cgcgcgtttgcagtcggcggacctgcaaccaccgaacccggccggctagcgctgggggtg
gtgcaagccaagagcggattgcgaggtaaaatctccggcctcgtggtggtcgcggccctg
ggaatgacgctcgccgccgcaatggtgagtcaaaaacccgttcacgccgacgggccaaca
gcagcgaacccgaccacggcccccgagacgcaaccgcgaaccgattcgtcgggcgacccg
ctcccggaaggagccgtcgcccggctggggacgttgcgtttccgaaccggccaaatgggg
acagcggcaagtgtcgcgttcgggccggacggcaaacaactgatctcggcgcacggcacg
gacgtgctcttcgtctgggaaccggcgtccgggcgcgagctgcggcgcctggacgcccct
caaatctgtagcggggtgagcgccactccgaacggccgacgaatgatcgccgtcgggcac
gccgaagtgtgggcgtgggatttggccgcgaaccaaccgctcgtactgtggaagaccaag
atcggtcgcctgattcgcgcgaacgccgaaatctccccggacggccggtgggtcgcggtc
ggcggcgaaacaaaaggaaacgtggtcctgctcgacgcggccacaggggacgaggtccga
acgctctccgttggcgggtccgggttcgcgttctcgtccgattccaagctcctcgcggtg
tgggccaaagcaccgagtttgaatgcgggtacgaagacggacgtgaccgtgtggaacgtg
gcggatggtaagctccggtacacactgccgttcgcaaacacgaccgtgacgagcgtcgcg
ttcgcaccggacgggaagacggtcgccacggtcgcggaagaccggcggctccaattgtgg
gaagcggatagcgggaaggcgcaatcgaagctggccgaggacgccgatccacacgcctcc
gtcggcttcgtcaaagacggtacactggtcgaagcgagtgcggggcggattcggttctgg
aaccccataacgggcaagcaatcgaaaccggccatcaagaccacggacacctcagacgtg
taccgcttatcggcagacggcacccaactggccggggccggattgttcggtgtcagtttg
catgaagtggcctccggtcgcgagatcgggaccacagccggaatgccggatggcttggtt
cactccgtcacgttcacgcccgactcttcggcgatggtaatggccgtttacagcgaatcg
gcgggtgccgcactgcacctctgggacgcgaaggacgggcggctccgccggcgcacagaa
gtcgggccacgccagatcgtttggggcgtcgatgtcgcgagtgacggcactgtgtcggcc
gcgtgcgtgccgctgtatcagacgccgcaacctccaacccgcatcgtgacctgggacgcg
gacctcgcccgcgtgcgtgcgacgttcagtctcccgaccggcgttcggtgcggagcggcc
tcgcccgataatcgcctgatcgcgatctcgacgggcgaacgggtcattctctgcgaccga
accaccggcaaagaagtgcgaaccctgccgggaaaatgtgaagccaccagcctcgtgttc
tcggccgatgggagctgcctcggcgccctcgaccccgcggccaagcgcgttacggtttgg
tcgctcgcggacaagcgcgacaagccgtgggtgtggtcgcccgccccggtcatgggcaag
gtcgcggatatccgcgcgcctctcgcattggctccagacggccggatgttcgcgctgaac
gcgaccgggatgcacggcattgtcagcgtgatcgaaaccgcgaccggtaccgagctgtgg
cacgcagacgcacgactgagcgggcttccagcccaggagttcgcgttcgcaccggacggt
cgcaccttagccgcggccggaacggatggaacggtgcgagtgtgggaagttgcaagtggt
ggagaacgctaccgcttcgcgggccaccgggccggggtgttctcggtcgcgtacagcccg
gatagtcgccgattggcctccgccagttacgacagtaccgcactcgtgtgggatgtggcc
accctgccccgcggaacttcaactgggaaagccgccgtaggagatccctggctcgttctc
gccggtcaggataccgcggccgcggctcgcgcgatcgcaacgctgaccgatgccccggac
accgcgatcccgttgcttcggaccaaactgacaccgccccccgcggcgaagcccgagcag
atccggcagtggctcaccgacctgggtgccgacgatttcaaggcccgcgaaaccgcgagc
cgcgaactatctctgcgaggtgacctggtgcttccggagctgcgccgggcactgactaac
gcggatgtggccgaagtgcgctcacggctggagcagttaatcaaccgactcggagcgcaa
tcaccggaccgccgggcggtgatccgagggatcgaagctctggaacggatgggaacgaac
ccggactcacaacgcctgctccgagagttagcagaagcacccgccgagagtgtgttggga
cgcgaggcccgggccgcgtacaggcggctcaccgctcccccgccgcagtaa
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