Gemmata sp. SH-PL17: VT84_26920
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Entry
VT84_26920 CDS
T04358
Symbol
glyA
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00260
Glycine, serine and threonine metabolism
ges00460
Cyanoamino acid metabolism
ges00630
Glyoxylate and dicarboxylate metabolism
ges00670
One carbon pool by folate
ges00680
Methane metabolism
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01120
Microbial metabolism in diverse environments
ges01200
Carbon metabolism
ges01230
Biosynthesis of amino acids
ges01240
Biosynthesis of cofactors
ges04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VT84_26920 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VT84_26920 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VT84_26920 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VT84_26920 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VT84_26920 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VT84_26920 (glyA)
Enzymes [BR:
ges01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VT84_26920 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Phage_H_T_join
Motif
Other DBs
NCBI-ProteinID:
AMV28067
UniProt:
A0A142XM60
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Position
complement(6350837..6352096)
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AA seq
419 aa
AA seq
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MDILQQADPEVFAAVAGERQRQRIGLEMIASENYTSTAVMAAQGSCLTNKYAEGYPGKRY
YGGCEFVDVVEKLAIDRVKQLFGGDHVNVQPHSGAQANMAVFLAALQPGDTIMGLDLAHG
GHLTHGMRLNFSGKYFKVVSYGVRKDDHRVDFDDLVAKAREHKPKLIIAGASAYPRTLDF
AKFAEVSAEIGAPLMVDMAHISGLVAAKEHPDPVPHAAFVTSTTHKTLRGPRGGFILCKQ
EWADKINSAVFPGVQGGPLMHVIAAKAVAFGEALKPEFKQYAKQVLANAKVLAEELLAAG
FPVVSGGTDTHLMLIDVTAKGSTGKLAEHALDAAGITVNKNMIPFDPRKPLDPSGIRLGT
PALTTRGMKEPEMKQVARWITDVLTAGGDAAVTARVKGGVLELGKQFPAPSEPAVVGAK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggacattcttcaacaggccgatcccgaagtgtttgctgcggtcgcgggcgagcgccag
cgccagcggatcggcttggagatgatcgcgagcgagaactacacgagcactgcggtgatg
gccgcgcagggctcgtgcctcaccaataagtacgccgaggggtacccgggcaagcggtac
tacggcgggtgcgagttcgtggacgtcgtggagaagctcgcgatcgaccgcgtgaagcag
ctcttcggcggcgaccacgtgaacgtgcaaccgcactccggcgcccaggcgaacatggcc
gtgttcctcgccgcgctccagcccggcgacacgatcatggggctggacctcgcccacggc
gggcacctcacccacgggatgcggctgaacttctccggcaagtatttcaaggtcgtcagc
tacggcgtgcggaaggacgaccaccgggtcgacttcgacgacctcgttgcgaaggcccgc
gagcacaagccgaagctcataatcgccggggcgagcgcctacccgcgcacgctcgacttc
gcgaagttcgccgaggtgagcgcagaaattggcgcgccgctcatggtggacatggcacac
atttcgggcctggtcgcggcgaaggagcacccggacccggtcccgcacgccgcgttcgtg
acgagcaccacgcacaagaccctgcgcgggccgcgcggcgggttcatcctgtgtaagcag
gagtgggccgacaagatcaactccgcggtgttccccggggtgcagggcgggccgctcatg
cacgtgatcgcggcgaaggcggtcgcgttcggtgaggcactgaagcccgagttcaaacag
tacgccaaacaggtgctggcgaacgcgaaggtgctggccgaggagctgctggcggccggg
ttcccggtcgtgtccgggggaaccgacacgcacctgatgctgatcgacgtgaccgcgaag
gggtcgaccggcaagctcgccgaacacgcgctcgacgcggcgggcatcaccgttaacaag
aacatgatcccgttcgacccgcgcaagccgctcgacccgtccggcatccggctcggtacg
cccgcgctgacgacccgcgggatgaaagagcccgagatgaagcaggtcgcgcgctggatc
acggacgtgctgacggccggcggtgacgcggccgtgaccgcccgcgtgaagggcggcgtg
ctagaattgggtaagcagttcccggcaccgagcgaaccggcggtggtcggcgcgaagtga
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