Gemmata sp. SH-PL17: VT84_27570
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Entry
VT84_27570 CDS
T04358
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03030
DNA replication
ges03430
Mismatch repair
ges03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VT84_27570
03430 Mismatch repair
VT84_27570
03440 Homologous recombination
VT84_27570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ges03032
]
VT84_27570
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_27570
Enzymes [BR:
ges01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VT84_27570
DNA replication proteins [BR:
ges03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VT84_27570
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VT84_27570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AMV28197
UniProt:
A0A142XMJ3
LinkDB
All DBs
Position
complement(6496440..6497459)
Genome browser
AA seq
339 aa
AA seq
DB search
MDALQFLAAKDSKRQSVYALVGDEDFLKRHARERIISVVLGEEDPSFAVSVYAGDKLDFS
TARNELETLPFLAPCRVVIVENADKFVTDNRPALEAYFTKPSRVGVLILDVKTFPETTKL
AKALPDAAKIGCKSLPIYKLSAWCVEWAKTAHKKKLVAGAADLLVELVGTSMGLLDQEIG
KLANAVGSKPGISAEDVDALVGRSKAADVFRIMDAVGEGRPGEALSILQELFGEGEDPMA
VIGPLTAQLRKLATVGRLHLVEKMALGPAMDAANVPKWDKARISFDKQLKHLGGRRLLKL
PDWLVEINHGLKGGNALPERVQVERLVVTLARPLALAKA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggacgcactgcaattcctcgcggcgaaggactccaagcgccaatcggtgtacgccctc
gtcggtgacgaagacttcctgaagcggcacgcccgcgagcgcatcatttctgtcgtgctc
ggggaggaagacccgtcgttcgcggtcagcgtgtacgcgggagacaaactcgatttctcc
acggcccgtaacgaactcgaaacactcccgttcctcgctccgtgtcgcgttgtgatcgtg
gaaaatgccgacaagttcgtgacggacaatcggcccgcgctggaggcgtacttcacgaaa
ccgagtcgcgtcggggtgctgattctcgacgtcaagacgttcccggaaactaccaaactc
gcgaaagcgctccccgacgcggccaagatcgggtgcaagtccctgcccatatacaagctc
tcggcgtggtgcgtcgaatgggcgaagaccgcacacaaaaagaagctcgtggcaggcgct
gcggacttgctcgtcgaactcgtcggcacgtcgatgggcttgctcgatcaggagatcggc
aagctcgcgaacgcggtgggttccaagcccggtatttcggccgaagacgtggacgcactc
gtgggccgcagcaaggcggccgacgtgttccgcattatggacgcggtcggcgaggggcgc
ccgggggaggccctgagcatccttcaggaactgttcggcgagggcgaagacccgatggcc
gttatcgggccgctcacggcccagctccgcaagctcgctaccgtggggcggctccattta
gtagagaaaatggcactcggtcccgcgatggatgcggccaacgtgccgaagtgggacaag
gcgcggatcagtttcgataagcagctcaagcacctcggcgggcgccgactgttgaaactt
cccgattggctggtcgaaatcaaccacggtttgaagggcgggaacgcccttccggaacgg
gtgcaagtcgagcgcctggttgtgaccctcgcgcgcccgctcgctcttgcaaaggcgtga
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