KEGG   Gemmata sp. SH-PL17: VT84_28395
Entry
VT84_28395        CDS       T04358                                 
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ges  Gemmata sp. SH-PL17
Pathway
ges03030  DNA replication
ges03430  Mismatch repair
ges03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ges00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VT84_28395 (polC)
   03430 Mismatch repair
    VT84_28395 (polC)
   03440 Homologous recombination
    VT84_28395 (polC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ges03032]
    VT84_28395 (polC)
   03400 DNA repair and recombination proteins [BR:ges03400]
    VT84_28395 (polC)
Enzymes [BR:ges01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VT84_28395 (polC)
DNA replication proteins [BR:ges03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VT84_28395 (polC)
DNA repair and recombination proteins [BR:ges03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VT84_28395 (polC)
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: AMV28357
LinkDB
Position
6689651..6690205
AA seq 184 aa
MTPRRKKPPVPLPPLDGPFVAIDFETADNGPDSACAVGVVRVENSKIVHREAILIRPPRE
RILFTYVHGITWPMVKSAPVFKDVWSKVAPVLEGVKFLAAHNAPFDRRVLSACCAAAELA
APALPFVCTVQLARRKWALKPANLPAVCRRLGIGLMHHDAGSDAEACARIVIAAAFPGSD
HDHS
NT seq 555 nt   +upstreamnt  +downstreamnt
atgaccccgcgccgcaagaagccgcccgttccgctcccgccgctggacggcccgttcgtg
gcgatcgacttcgagacggccgacaacggccccgatagcgcctgcgcggtgggggtagtt
cgagtggaaaactcgaagatcgttcaccgcgaagcaatactgatccgcccgccgcgcgag
cgcattctgttcacttacgttcacggcatcacgtggccgatggtgaaaagcgcgccggtc
ttcaaagatgtgtggtcgaaggtcgccccggtactcgaaggggtgaagttcctcgccgca
cacaacgccccgttcgaccggcgcgtgctgtccgcgtgctgcgccgcggcggaactggcg
gcccccgccctgcccttcgtctgcacagttcagctcgcgcgccgaaagtgggcgctcaaa
cccgcgaacctgcccgcggtgtgtcggcgtcttgggatcggcctgatgcaccacgacgcc
gggtccgacgccgaagcgtgcgcccggatcgtgatcgccgccgcgttccctggaagcgat
cacgaccattcttga

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