Gemmata sp. SH-PL17: VT84_28395
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Entry
VT84_28395 CDS
T04358
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03030
DNA replication
ges03430
Mismatch repair
ges03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VT84_28395 (polC)
03430 Mismatch repair
VT84_28395 (polC)
03440 Homologous recombination
VT84_28395 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ges03032
]
VT84_28395 (polC)
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_28395 (polC)
Enzymes [BR:
ges01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VT84_28395 (polC)
DNA replication proteins [BR:
ges03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VT84_28395 (polC)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VT84_28395 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AMV28357
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All DBs
Position
6689651..6690205
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AA seq
184 aa
AA seq
DB search
MTPRRKKPPVPLPPLDGPFVAIDFETADNGPDSACAVGVVRVENSKIVHREAILIRPPRE
RILFTYVHGITWPMVKSAPVFKDVWSKVAPVLEGVKFLAAHNAPFDRRVLSACCAAAELA
APALPFVCTVQLARRKWALKPANLPAVCRRLGIGLMHHDAGSDAEACARIVIAAAFPGSD
HDHS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcgccgcaagaagccgcccgttccgctcccgccgctggacggcccgttcgtg
gcgatcgacttcgagacggccgacaacggccccgatagcgcctgcgcggtgggggtagtt
cgagtggaaaactcgaagatcgttcaccgcgaagcaatactgatccgcccgccgcgcgag
cgcattctgttcacttacgttcacggcatcacgtggccgatggtgaaaagcgcgccggtc
ttcaaagatgtgtggtcgaaggtcgccccggtactcgaaggggtgaagttcctcgccgca
cacaacgccccgttcgaccggcgcgtgctgtccgcgtgctgcgccgcggcggaactggcg
gcccccgccctgcccttcgtctgcacagttcagctcgcgcgccgaaagtgggcgctcaaa
cccgcgaacctgcccgcggtgtgtcggcgtcttgggatcggcctgatgcaccacgacgcc
gggtccgacgccgaagcgtgcgcccggatcgtgatcgccgccgcgttccctggaagcgat
cacgaccattcttga
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