Gemmata sp. SH-PL17: VT84_28845
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Entry
VT84_28845 CDS
T04358
Symbol
lysS
Name
(GenBank) Lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VT84_28845 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ges01007
]
VT84_28845 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ges03016
]
VT84_28845 (lysS)
Enzymes [BR:
ges01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
VT84_28845 (lysS)
Amino acid related enzymes [BR:
ges01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VT84_28845 (lysS)
Transfer RNA biogenesis [BR:
ges03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
VT84_28845 (lysS)
Prokaryotic type
Other AARSs
VT84_28845 (lysS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AMV28447
UniProt:
A0A142XN76
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All DBs
Position
complement(6794731..6796227)
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AA seq
498 aa
AA seq
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MPEETSDLAEVRLQKLQQIEALGLDPWGQRFDNAQPIGDIRQLPAENFDETKPGPKVRAA
GRVVRYRTGGKLLFLEIWDQTGRVQLMIRVNKVTPQEWQVAQLLDLGDLVGVDGEFGKTK
TGELTIQVEKLTFLTKSLEPHPKDVFGMGDIEFRLRHRYLDMIYTPDTLRRAHQRVKIIR
TIRTHLDAQGYMEVETPTLHAIAGGAAARPFETHHNALDIDLFVRIALELPLKRLLVGGI
EKVYELGRVFRNEGISPRHNPEFTMLELYQAYGDYRSMMDLTEGLIVACVDILGGGRTIP
FGEKTVNFEPPFQRAKYADLFHEHVGCDMTDEVAVRAAARAENIELEMAPTKGAPKVAKA
HVVLVQELFEDLVEEKLVGPVFVYDYPSPLCPLTKRKRENPAIAERFELYVHGMELANAY
TELNDPITQEQTFTQQLAGLSDEDSMAKMDHDFIRALRHGMPPAGGLGIGIDRLVMLLTN
TQTIRDVILFPLLRPEAK
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaagaaacatccgacctcgccgaagttcggctccaaaagctccagcagatcgag
gccctcggcctcgacccgtggggccagcggttcgacaacgcccaaccgatcggcgacatc
cgccagctcccggccgagaacttcgacgagacgaagccggggccgaaggtgcgcgccgct
gggcgcgtggtgcgctaccgcaccggcgggaagctcctgttcctcgaaatctgggaccag
accgggcgcgtgcagttgatgatccgcgtgaacaaggtcacgccgcaggagtggcaggtc
gcacaactgctcgacctcggggatctcgttggcgtggacggcgagttcggcaagacgaag
accggcgaactcacgatccaggtcgagaagctgacgttcctcacgaagagcctggaaccg
cacccgaaggacgtgttcgggatgggggacatcgagttccggttgcggcaccggtacctc
gacatgatctacaccccggacacgctgcgccgcgcgcaccagcgcgtgaagatcatccgc
acgatccgcacccacctcgacgctcagggctacatggaggtggaaacgcccacgctgcac
gcgatcgcgggcggggcggccgcgcgcccgttcgagacgcaccacaacgcgctcgacatc
gatctgttcgtgcgcatcgcgctcgaactgcccctgaagcgcctactggtcggcgggatc
gaaaaggtgtacgaactcggtcgggtgttccgcaacgagggcatcagcccgcgacacaac
cccgagttcaccatgctcgaactgtaccaggcttacggcgactaccgcagcatgatggac
ctgaccgaggggttgatcgtggcctgcgttgatatcctggggggcgggcgcacgatcccg
ttcggcgagaagacggtgaacttcgagccgccgttccagcgcgcgaagtacgcggacctg
ttccacgaacacgtcggctgcgacatgaccgacgaggtcgcggtgcgggccgcagcgcgg
gccgagaacatcgaactcgaaatggccccgacgaagggcgcgccgaaggtcgcgaaggcg
cacgtcgttctcgtgcaggaactgttcgaggacttggtggaagagaagctggtcgggccg
gtgttcgtgtacgactacccgtccccgctgtgcccgctgaccaagcggaagcgcgaaaac
cccgcgatcgcggagcggttcgagttgtacgttcacggcatggaactggcgaacgcctac
accgaactgaacgacccgatcacgcaggagcagacgttcacgcagcaactggccgggctg
tccgatgaagattcgatggccaagatggaccacgatttcattcgcgcgctgcgccacggg
atgccgcccgcgggcggtttggggatcggcatcgaccggctcgtgatgctgctcaccaac
acgcagaccatccgcgacgtgatcctattcccgctgctgcgccccgaagcgaagtaa
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