Gemmata sp. SH-PL17: VT84_29040
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Entry
VT84_29040 CDS
T04358
Symbol
rfaF_1
Name
(GenBank) ADP-heptose--LPS heptosyltransferase 2
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00540
Lipopolysaccharide biosynthesis
ges01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VT84_29040 (rfaF_1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ges01005
]
VT84_29040 (rfaF_1)
Enzymes [BR:
ges01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
VT84_29040 (rfaF_1)
Lipopolysaccharide biosynthesis proteins [BR:
ges01005
]
Core region
VT84_29040 (rfaF_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
DUF3646
Motif
Other DBs
NCBI-ProteinID:
AMV28486
UniProt:
A0A142XNE1
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Position
6840800..6841867
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AA seq
355 aa
AA seq
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MHRIALFLPNWIGDVVMATPAIRAVRAAFPAAELVAVCKPYVADVLAGAPWFGRTILADK
RGPRSQRLFGVARQLREAHVDTALLFPNSFRTALIAYLGGSTRIVGFARYARGRMLTDKL
YAKTDDRGRFVPSPALDDYNRLAAALGAAPDHRMELFTTPADDTAAEAVWKQFGLARYAR
VVALNPGAAFGAAKHWGEDHFAELARALTSRFGCGALVLCGPGEREMARKIAEESRSPHV
FALSDAALSLGLTKALVKRADLLVTTDSGPRHFAAAFNRPVVSLFGPTHIEWTETYFAKE
ICLQKKLACGPCQQRVCPLGHHRCMRELTPAEVFRAAEQLLTRVPLATREVPRAA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaattgcgctctttctcccgaactggatcggcgacgtggtgatggccacgccc
gcgatccgcgccgtgcgcgcggcgttccccgcggccgaactggtggcagtctgcaagccc
tatgtcgcagacgtactcgcgggcgcgccctggttcgggcgcacgatcctcgcggacaag
cgcggcccgcgttcgcagcgcctgttcggtgtcgcgcgccaactgcgcgaagcacacgtt
gataccgccctgctcttccccaactcgttccgcacagcacttattgcctacttgggcgga
agcacgcgcatcgtcgggttcgcgcggtacgcacgcgggcgaatgctgaccgacaagctc
tacgccaagaccgacgatcgcggccggttcgtgccgtcacccgcgctcgatgactacaac
cggctcgcagcagcactgggagccgcccccgatcaccggatggaactgttcaccacaccc
gccgacgacacggcggcggaagccgtgtggaaacaattcggccttgctcgttacgcgcga
gtagtggcactcaatcccggtgcggcgttcggcgcggcgaagcactggggagaggatcat
tttgcggaactcgcccgcgcgctcacgtcgcgtttcgggtgcggggcgctcgtgctgtgc
ggccccggcgagcgcgaaatggcccgaaaaattgcggaggagagccgctcgccgcacgtg
ttcgcactcagcgacgccgcactgtcactcgggttaacgaaagcgctcgtgaagcgtgcc
gacctactcgtaaccaccgacagcggcccgcggcacttcgcggccgcgttcaaccgaccg
gtcgtgtcactgttcggtcccacgcacatcgagtggacggagacgtacttcgcgaaggaa
atttgcctccagaagaagctcgcatgcggcccgtgccagcagcgcgtgtgccctctgggg
caccaccgctgtatgcgtgaattgacacccgcagaagtcttccgagcggctgaacagctc
ctgacgcgagtgcccctcgcaacacgggaggtaccgcgtgccgcttga
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