Gemmata sp. SH-PL17: VT84_29055
Help
Entry
VT84_29055 CDS
T04358
Symbol
rfaG
Name
(GenBank) Lipopolysaccharide core biosynthesis protein RfaG
KO
K02844
UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00540
Lipopolysaccharide biosynthesis
ges01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VT84_29055 (rfaG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ges01005
]
VT84_29055 (rfaG)
Lipopolysaccharide biosynthesis proteins [BR:
ges01005
]
Core region
VT84_29055 (rfaG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
GT4-conflict
Glyco_trans_1_2
Glyco_trans_4_4
Gtf3_C
Motif
Other DBs
NCBI-ProteinID:
AMV28489
LinkDB
All DBs
Position
6844304..6845473
Genome browser
AA seq
389 aa
AA seq
DB search
MDIALCYESVLPARGGAETYLGDLARRLARDGHAVHLYAARWDANALPPATHFHRIDVPS
GPRFLRPWRFGAACEEALKHNQHDVSIGFDKTWGQDVLYPQGGLHAASAAHNLLKFPNAL
SRGIAALGKWLDPAAWSFARLERKQYLGPNQPLVIVNSFMVQRHFEQFYGVPPESVRVVR
SAIDPMRFAAEDRLKRRHEERGRWMVFPEETVGLFVAMNYRLKGLSPLLKALALVPRDKP
FRLAVVGNPKFKRYQREAEKLGVADRVVFLGHRDDPKNCYFAADFLVHPTFYDPCSLVAL
EALACGLPVITSRYNGASELLTPPSDGAVINDPHNAKDLAAAMHRFTDHSYRAEASSAAR
QTGTKWTFEHHYQALLNVFGEVRKIKKAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgcactgtgttacgagagcgtgctcccggcacgcggcggggcggaaacctac
ctcggcgacctcgcgcgccggctcgcgcgcgacgggcacgcggttcacctctatgcggcg
cgctgggacgcgaacgcgctgccgcccgcgacgcacttccaccgcattgatgtgccgagc
ggcccgcggttcctccgcccgtggcggttcggggccgcgtgcgaagaagcgctcaaacac
aaccaacacgacgtgagcatcggcttcgacaaaacgtggggccaggacgttctctacccg
cagggcgggttacacgccgcgagcgcggcccacaacctgctgaaattccctaacgcgctt
tcgcgcggaattgccgcattgggtaagtggctcgacccggccgcctggtcgttcgcgcgg
ctcgagcgcaagcagtacctggggcccaaccagccccttgtgatcgtgaatagcttcatg
gtgcaacgacacttcgagcagttctacggcgtgccgcccgagtccgtgcgcgtggtgcgc
agcgccatcgacccgatgcggttcgcggccgaagaccggctcaagcgccggcacgaggag
cgcgggcggtggatggtgttcccggaagagacggtcgggctgttcgtcgcgatgaactac
cggctgaagggcctctccccgctcctgaaagcactcgcgctcgtcccgcgcgacaagccg
ttccgattagcagtggtcgggaacccgaagttcaagcggtaccagcgggaagcggagaag
ctcggcgtcgcggaccgcgtggtgttcctggggcaccgcgacgacccgaagaactgctac
ttcgccgcagatttcctcgttcacccgacgttctacgatccgtgctcgcttgtcgcgctc
gaagcactcgcgtgcgggctgccggtcatcacgtcgcggtacaacggcgcgagcgaactg
ctcactccgccgagcgacggcgcggtcatcaacgacccacacaatgcgaaggatctggcc
gctgcgatgcaccggttcacggaccattcttaccgcgcagaagcatcgagtgccgcacga
caaacgggcacgaaatggaccttcgagcaccactaccaggcgctgctcaacgtgttcggt
gaagtgcgcaaaatcaagaaagccgcataa
DBGET
integrated database retrieval system
