Gemmata sp. SH-PL17: VT84_29095
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Entry
VT84_29095 CDS
T04358
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00540
Lipopolysaccharide biosynthesis
ges01100
Metabolic pathways
ges01250
Biosynthesis of nucleotide sugars
Module
ges_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VT84_29095 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ges01005
]
VT84_29095 (hldD)
Enzymes [BR:
ges01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VT84_29095 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
ges01005
]
Core region
VT84_29095 (hldD)
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
AMV28497
UniProt:
A0A142XND9
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All DBs
Position
6852676..6853659
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AA seq
327 aa
AA seq
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MIAVTGAAGFIGSNLAHRLAAEGHLLLLVDHELTPAKAENFVGLPRFAFSRHDHFLDDLT
AGRIEPDAIFHLGACSSTTETSWDYLFRNNVEYTRHLWEWCARKRKPLFYASSAATYGDG
SLGFDDHTSPGELRPLNLYGKSKNDFDIWALAEVAANRPAPSKWAGLKFFNVYGPRESHK
GRMASVVYQTHKQVKATGEMKLFRSTDPQFSDGGQRRDFVFVGDCVNHLLWLWRNEAPCG
VYNSGSGEARTFHDLARGVFTALGLQPRISFIDMPRDLAGKYQNFTRAETQKLRGAGCDV
PATALEEGVRETVQWLERGSAPALRAA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgtcaccggcgcggccgggttcatcggatcgaacctcgcccaccgactcgca
gccgaagggcacttgcttctcctggtcgatcacgaacttacgcccgcaaaagcagagaac
ttcgtcgggctgccgcggttcgcgttcagccgccacgatcacttcctggacgacctcaca
gccggacgcatcgaaccggacgcgatctttcacctcggcgcgtgcagttccaccacggaa
acgagttgggactacctctttcgcaacaacgtggagtacacgcggcacttgtgggaatgg
tgtgcccgaaagcggaaaccgctgttttacgcttcgagtgccgcgacttacggcgacggc
tcgctcggtttcgacgaccacacttcgccgggcgaactgcgcccactgaacctctacggc
aagagcaagaacgatttcgatatctgggcactcgcagaagttgcggccaaccggcccgct
ccctcaaagtgggccgggctgaagttcttcaacgtgtacggcccgcgtgaatcgcacaag
gggcgcatggcaagcgtcgtttaccagacgcacaagcaggtcaaagcgaccggcgaaatg
aagctgtttcgctccaccgatccgcagttcagcgacggcggccagcgccgcgacttcgtg
ttcgtcggcgattgcgtcaatcaccttctctggttgtggcgcaacgaagccccctgtggc
gtttataattctggtagcggcgaggcccgcacgttccacgatctcgcacgcggggtgttc
accgcactcgggttacagccgcgcatcagcttcatcgacatgccccgcgacctggccggg
aagtaccagaacttcacccgagccgagacgcagaagctgcggggcgccgggtgcgacgtc
cccgcgaccgcgctcgaagagggcgtccgcgagacggtgcagtggctggaacgcggttcg
gcgccggctctccgtgcggcgtga
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