Gemmata sp. SH-PL17: VT84_29270
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Entry
VT84_29270 CDS
T04358
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00010
Glycolysis / Gluconeogenesis
ges00020
Citrate cycle (TCA cycle)
ges00260
Glycine, serine and threonine metabolism
ges00280
Valine, leucine and isoleucine degradation
ges00310
Lysine degradation
ges00380
Tryptophan metabolism
ges00620
Pyruvate metabolism
ges00630
Glyoxylate and dicarboxylate metabolism
ges00640
Propanoate metabolism
ges00670
One carbon pool by folate
ges00785
Lipoic acid metabolism
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01120
Microbial metabolism in diverse environments
ges01200
Carbon metabolism
ges01210
2-Oxocarboxylic acid metabolism
ges01240
Biosynthesis of cofactors
Module
ges_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ges_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ges_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
ges_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
VT84_29270 (lpdA)
00020 Citrate cycle (TCA cycle)
VT84_29270 (lpdA)
00620 Pyruvate metabolism
VT84_29270 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
VT84_29270 (lpdA)
00640 Propanoate metabolism
VT84_29270 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VT84_29270 (lpdA)
00280 Valine, leucine and isoleucine degradation
VT84_29270 (lpdA)
00310 Lysine degradation
VT84_29270 (lpdA)
00380 Tryptophan metabolism
VT84_29270 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
VT84_29270 (lpdA)
00670 One carbon pool by folate
VT84_29270 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ges04147
]
VT84_29270 (lpdA)
Enzymes [BR:
ges01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
VT84_29270 (lpdA)
Exosome [BR:
ges04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
VT84_29270 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
GIDA
Pyr_redox_3
FAD_binding_2
3HCDH_N
HI0933_like
AlaDh_PNT_C
NAD_binding_8
FAD_binding_3
NAD_binding_7
UDPG_MGDP_dh_N
Lys_Orn_oxgnase
DAO
Thi4
Motif
Other DBs
NCBI-ProteinID:
AMV28532
UniProt:
A0A142XPC1
LinkDB
All DBs
Position
6897191..6898615
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AA seq
474 aa
AA seq
DB search
MSDVRETQLLVIGGGPGGYPAALHAADHGIKVTLVDEGAKLGGVCLNRGCIPSKALLHTA
KIIREAHEMANYGVTFGEPTLDLAKLRDFVQAKVVSKLTGGIGQLTKGRGVDVVKGRAVF
TSPNTVEVTGDAPQTIKFQNCIIATGSLPVVPKPWQINDDRVMDSTGALLLPDVPKRFLV
IGGGYIGLEIGSVYAALGSKVTVVEALDRILFMADKDLVDPLEKKLKSEFEAIYTATKVM
GLEATKDGIVVKLEGAGAPASLTFDRVLISVGRRPNSAGLGLDKAGVNVTEKGFIPIDKQ
RRTNVPHIFAIGDVGEEPGLAHKATAEARVVVEVIHGEPAEWNPRAIPAVIFTDPEIAWA
GITQKEADEKKIPYEALNFPWAASGRAVSIARTEGRTKMLVDPETKRILGVGIVGAGAGE
MIAESVLAIEMGAVARDVLESIHPHPTLSETVMESAELAYGAATHVGRPRKVAR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgttcgcgaaacgcagctcctcgtcatcggtggcggccccggcgggtacccg
gccgcgctccacgccgccgaccacgggatcaaggtcacgctggtggacgagggggccaag
ctcggcggcgtgtgcctcaaccgcgggtgcatcccgagcaaggcgctactgcacaccgcg
aagatcattcgcgaagcgcacgagatggcgaactacggcgtcacgttcggcgaaccgacg
ctcgacctcgccaaactgcgcgacttcgtgcaggcgaaggtggtcagcaagctgacgggc
ggcatcggccagctcacgaaggggcgcggggtcgacgtggtgaaggggcgcgcggtgttc
acgtcgcccaacacggtcgaggtgaccggcgacgcgccgcaaacgatcaagttccagaac
tgcatcatcgcgaccgggtcgctcccggtggtgccgaagccgtggcagatcaacgacgac
cgcgtgatggacagcaccggtgcgctcctgttgccggacgtgccgaagcggttcctcgtg
attggcggtggatatatcgggctggaaatcggcagcgtgtacgcggccctgggcagcaag
gtgacggtggtcgaagcgctcgatcgcatcctcttcatggccgacaaagatctcgtcgat
ccgctggaaaagaaactcaagagcgagttcgaggcgatttacaccgccacgaaggtgatg
gggctggaagcgacgaaggacggcatcgtcgtgaagctcgaaggcgcgggggcgccggcg
tcgctgacgttcgaccgcgtgctcatctccgtcgggcgccggccgaactcggcggggctc
ggactcgacaaggccggcgtgaacgtgaccgagaagggcttcatccccatcgacaaacag
cgccgcacgaacgtcccgcacatcttcgcgatcggcgacgtgggcgaggaaccgggcctg
gcgcacaaggccacggcggaggcccgcgtcgtggtggaagtgatccacggcgaaccggcg
gagtggaacccgcgcgcgatcccggccgtgatcttcaccgaccccgaaatcgcatgggcc
ggcatcacgcagaaggaagccgacgagaagaagatcccctacgaggcgctgaacttcccg
tgggccgcgagcggccgggccgtgagcatcgcgcgcacggaggggcgcacgaagatgctc
gtcgaccccgaaaccaagcgcattctgggggtggggattgtgggtgcgggtgccggcgag
atgatcgcggagagtgtcctggcgatcgaaatgggcgcggtggcgcgcgacgtgttggag
agcatccacccgcacccgacgctgagcgaaaccgtgatggagagcgccgaactcgcttac
ggcgccgccacgcacgtcggccggccgcgcaaggtcgcgcggtag
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