KEGG   Gemmata sp. SH-PL17: VT84_29270
Entry
VT84_29270        CDS       T04358                                 
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
ges  Gemmata sp. SH-PL17
Pathway
ges00010  Glycolysis / Gluconeogenesis
ges00020  Citrate cycle (TCA cycle)
ges00260  Glycine, serine and threonine metabolism
ges00280  Valine, leucine and isoleucine degradation
ges00310  Lysine degradation
ges00380  Tryptophan metabolism
ges00620  Pyruvate metabolism
ges00630  Glyoxylate and dicarboxylate metabolism
ges00640  Propanoate metabolism
ges00670  One carbon pool by folate
ges00785  Lipoic acid metabolism
ges01100  Metabolic pathways
ges01110  Biosynthesis of secondary metabolites
ges01120  Microbial metabolism in diverse environments
ges01200  Carbon metabolism
ges01210  2-Oxocarboxylic acid metabolism
ges01240  Biosynthesis of cofactors
Module
ges_M00009  Citrate cycle (TCA cycle, Krebs cycle)
ges_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ges_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
ges_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:ges00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    VT84_29270 (lpdA)
   00020 Citrate cycle (TCA cycle)
    VT84_29270 (lpdA)
   00620 Pyruvate metabolism
    VT84_29270 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    VT84_29270 (lpdA)
   00640 Propanoate metabolism
    VT84_29270 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    VT84_29270 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    VT84_29270 (lpdA)
   00310 Lysine degradation
    VT84_29270 (lpdA)
   00380 Tryptophan metabolism
    VT84_29270 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    VT84_29270 (lpdA)
   00670 One carbon pool by folate
    VT84_29270 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ges04147]
    VT84_29270 (lpdA)
Enzymes [BR:ges01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     VT84_29270 (lpdA)
Exosome [BR:ges04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   VT84_29270 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 3HCDH_N HI0933_like AlaDh_PNT_C NAD_binding_8 FAD_binding_3 NAD_binding_7 UDPG_MGDP_dh_N Lys_Orn_oxgnase DAO Thi4
Other DBs
NCBI-ProteinID: AMV28532
UniProt: A0A142XPC1
LinkDB
Position
6897191..6898615
AA seq 474 aa
MSDVRETQLLVIGGGPGGYPAALHAADHGIKVTLVDEGAKLGGVCLNRGCIPSKALLHTA
KIIREAHEMANYGVTFGEPTLDLAKLRDFVQAKVVSKLTGGIGQLTKGRGVDVVKGRAVF
TSPNTVEVTGDAPQTIKFQNCIIATGSLPVVPKPWQINDDRVMDSTGALLLPDVPKRFLV
IGGGYIGLEIGSVYAALGSKVTVVEALDRILFMADKDLVDPLEKKLKSEFEAIYTATKVM
GLEATKDGIVVKLEGAGAPASLTFDRVLISVGRRPNSAGLGLDKAGVNVTEKGFIPIDKQ
RRTNVPHIFAIGDVGEEPGLAHKATAEARVVVEVIHGEPAEWNPRAIPAVIFTDPEIAWA
GITQKEADEKKIPYEALNFPWAASGRAVSIARTEGRTKMLVDPETKRILGVGIVGAGAGE
MIAESVLAIEMGAVARDVLESIHPHPTLSETVMESAELAYGAATHVGRPRKVAR
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgtccgacgttcgcgaaacgcagctcctcgtcatcggtggcggccccggcgggtacccg
gccgcgctccacgccgccgaccacgggatcaaggtcacgctggtggacgagggggccaag
ctcggcggcgtgtgcctcaaccgcgggtgcatcccgagcaaggcgctactgcacaccgcg
aagatcattcgcgaagcgcacgagatggcgaactacggcgtcacgttcggcgaaccgacg
ctcgacctcgccaaactgcgcgacttcgtgcaggcgaaggtggtcagcaagctgacgggc
ggcatcggccagctcacgaaggggcgcggggtcgacgtggtgaaggggcgcgcggtgttc
acgtcgcccaacacggtcgaggtgaccggcgacgcgccgcaaacgatcaagttccagaac
tgcatcatcgcgaccgggtcgctcccggtggtgccgaagccgtggcagatcaacgacgac
cgcgtgatggacagcaccggtgcgctcctgttgccggacgtgccgaagcggttcctcgtg
attggcggtggatatatcgggctggaaatcggcagcgtgtacgcggccctgggcagcaag
gtgacggtggtcgaagcgctcgatcgcatcctcttcatggccgacaaagatctcgtcgat
ccgctggaaaagaaactcaagagcgagttcgaggcgatttacaccgccacgaaggtgatg
gggctggaagcgacgaaggacggcatcgtcgtgaagctcgaaggcgcgggggcgccggcg
tcgctgacgttcgaccgcgtgctcatctccgtcgggcgccggccgaactcggcggggctc
ggactcgacaaggccggcgtgaacgtgaccgagaagggcttcatccccatcgacaaacag
cgccgcacgaacgtcccgcacatcttcgcgatcggcgacgtgggcgaggaaccgggcctg
gcgcacaaggccacggcggaggcccgcgtcgtggtggaagtgatccacggcgaaccggcg
gagtggaacccgcgcgcgatcccggccgtgatcttcaccgaccccgaaatcgcatgggcc
ggcatcacgcagaaggaagccgacgagaagaagatcccctacgaggcgctgaacttcccg
tgggccgcgagcggccgggccgtgagcatcgcgcgcacggaggggcgcacgaagatgctc
gtcgaccccgaaaccaagcgcattctgggggtggggattgtgggtgcgggtgccggcgag
atgatcgcggagagtgtcctggcgatcgaaatgggcgcggtggcgcgcgacgtgttggag
agcatccacccgcacccgacgctgagcgaaaccgtgatggagagcgccgaactcgcttac
ggcgccgccacgcacgtcggccggccgcgcaaggtcgcgcggtag

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