Gemmata sp. SH-PL17: VT84_29785
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Entry
VT84_29785 CDS
T04358
Symbol
groL1_2
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT84_29785 (groL1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ges03019
]
VT84_29785 (groL1_2)
03110 Chaperones and folding catalysts [BR:
ges03110
]
VT84_29785 (groL1_2)
03029 Mitochondrial biogenesis [BR:
ges03029
]
VT84_29785 (groL1_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ges04147
]
VT84_29785 (groL1_2)
Enzymes [BR:
ges01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VT84_29785 (groL1_2)
Messenger RNA biogenesis [BR:
ges03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VT84_29785 (groL1_2)
Chaperones and folding catalysts [BR:
ges03110
]
Heat shock proteins
HSP60 / Chaperonin
VT84_29785 (groL1_2)
Mitochondrial biogenesis [BR:
ges03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VT84_29785 (groL1_2)
Exosome [BR:
ges04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VT84_29785 (groL1_2)
Exosomal proteins of other body fluids (saliva and urine)
VT84_29785 (groL1_2)
Exosomal proteins of breast cancer cells
VT84_29785 (groL1_2)
Exosomal proteins of colorectal cancer cells
VT84_29785 (groL1_2)
Exosomal proteins of bladder cancer cells
VT84_29785 (groL1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KIX_2
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
AMV28633
LinkDB
All DBs
Position
7008479..7010116
Genome browser
AA seq
545 aa
AA seq
DB search
MSAKQIAFDQEARDAMKRGIGKLARAVKVTLGPKGRNVIIQKSFGSPTVTKDGVTVAKEI
QLPDHYENMGAAMVKEVASKTSDVAGDGTTTATVLAEAIFNEGLKAVVAGTNPMLMKRGM
EKAVEDIVAKLKEMSIPVGGKKGLENVATVAANGDADIGKKLAEAMDKVGKDGVITVEEA
KTIETNYEFVEGMQFDRGYLSPYFINNSETMECELEDAYVLVYEKKISAARDMLPILEKV
VQQSKPLLIIAEEVDGEALATLVVNVIKSNYAFKVCAVKAPGYGDRRKAILQDIAVLTGG
TAIFEDLGMKLETVTLEDLGSAKKIKVDKDNTTVIEGGGKKAAIKERIATIQKELEKSTS
DYDKEKLQERVAKLSGGVAKINVGGATESEVKEKKMRVEDAMHATKAAHQEGILPGGGTA
LLRSSTGLAAPEGLSDDEKVGYKIIVRACRAPVKQIAENAGEDGNVIAKEVLAKNDKNYG
YDARAGEYDDMVKRGIIDPTKVVRSALQNAASVATLLLTSDAMIAEEQKKDSKKDAAPGA
YDDMY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccaagcagatcgcgttcgaccaggaagcccgcgacgccatgaagcgcggcatc
ggcaagttggcccgcgcggtcaaagtcacgctggggccgaagggccgcaacgtcatcatc
cagaagtcgttcggcagcccgaccgtcaccaaggacggcgtgaccgtggcgaaggagatc
cagctcccggaccactacgagaacatgggcgccgcgatggtcaaggaggtcgcgtcgaag
acctccgacgtggccggtgacggcaccaccaccgcgaccgtgcttgcggaagcgatcttc
aacgaggggctgaaggccgtcgtcgcgggcaccaacccgatgctcatgaaacgcgggatg
gaaaaggccgtcgaggacatcgtcgccaagctcaaggaaatgagcatcccggtcggcggg
aaaaagggcctggagaacgtcgccaccgtcgccgccaacggcgacgcggacatcggcaag
aagttggccgaggcgatggacaaggtcggtaaggacggcgtcatcaccgtcgaagaggcc
aagaccatcgagacgaactacgagttcgtcgaggggatgcagttcgaccgcggctacctg
tcgccgtacttcatcaacaactccgaaacgatggagtgcgaactcgaagacgcctacgtc
ctcgtctacgagaagaagatcagcgccgcccgcgacatgctcccgatcctggagaaggtc
gtccaacagagcaagccgctcctcatcatcgccgaagaagtcgacggcgaagcgctcgcc
acgctcgtggtgaacgtcatcaagtcgaactacgccttcaaggtgtgcgcggtgaaggcc
ccgggctacggcgaccgccgcaaggccatcctccaggacatcgcggtgctcaccggcggc
acggcgatttttgaagacctgggcatgaagctcgaaaccgtcacgctcgaagacctgggc
tccgccaagaagatcaaggtggacaaggacaacaccaccgtcatcgagggcggcggcaag
aaggcggcgatcaaggagcgcatcgccaccatccagaaggaactggaaaagagcaccagc
gactacgacaaggaaaagctccaggagcgcgtcgcgaagctgtccggcggggtcgcgaag
attaacgtcggcggggcgaccgagagcgaagtgaaggaaaagaagatgcgggtcgaggac
gcgatgcacgcgaccaaggccgcgcaccaggaaggcatcctgcccggcggcggcaccgcg
ctgctccgctccagcaccgggctggccgcccccgaggggctcagcgacgacgagaaggtc
gggtacaagatcatcgtccgcgcgtgccgcgcgccggtgaagcagatcgcggaaaacgcc
ggcgaagacggcaacgtgatcgcgaaggaagtgctcgcgaagaacgacaagaactacggg
tacgacgcccgcgccggcgagtacgacgacatggtgaagcgcgggatcatcgacccgacg
aaggtcgtccgcagcgccctccagaacgcggccagcgtcgccacgctgctcctcacctcc
gacgcgatgatcgccgaagagcagaagaaggacagcaagaaggacgccgcccccggcgca
tacgacgacatgtactaa
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