Gemmata sp. SH-PL17: VT84_29810
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Entry
VT84_29810 CDS
T04358
Symbol
csd_3
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00450
Selenocompound metabolism
ges01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VT84_29810 (csd_3)
Enzymes [BR:
ges01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
VT84_29810 (csd_3)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
VT84_29810 (csd_3)
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Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AMV28638
UniProt:
A0A142XNM7
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Position
complement(7014377..7015522)
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AA seq
381 aa
AA seq
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MIYLDNAATSFPKPESVYVAMDRFARTSLANPGRSGHKMALESEHALSDARHRLNRFFNG
RDADRWAFTLNCTDALNMAFKGVLNDGDHVITTDLEHNSVSRPLVALAQAGRITLTRVPA
DAGGSIDPEAIRAAIGPKTRLIAMTHASNVLGTVQPIADVGRIAREHDLLFLVDAAQTAG
AFPLDIQAANIDLLAFPGHKSLLGPTGSGALFVGPRATLRPWREGGTGGDSLTPTQPTDF
PHHLEGGTPNVLGVVGLIAGLDFVEEKGVEAIHRHEQALCERLRAALVELPGFELFGHAD
PARRVSALSFRCEVLAAPELAGLLDQSFNIAVRPGLHCAPYIHKALGTAPDGLVRVSPGA
FNTEADIDHLVDALKQITGTV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatctacctcgataacgccgcgaccagtttcccgaagccggagagcgtgtacgtcgcg
atggaccgcttcgcgcggacctcgctcgccaaccccgggcgctccgggcacaagatggcg
ctggagtccgagcacgcgctgtccgacgcccggcaccggctcaaccgcttcttcaacggg
cgcgacgcggaccgctgggcgttcacgctcaactgcaccgacgcgcttaacatggcgttc
aagggcgtgctgaacgacggcgaccacgtcatcaccaccgacctcgaacacaacagcgtg
tcgcgcccgctcgtcgcgctcgcccaggcggggcgcatcacgctcactcgcgtgccggcc
gacgcgggcgggagcatcgacccggaagcgatccgcgccgcgatcgggccgaagacccgg
ctcatcgcgatgacgcacgcgagcaacgtgctcggcaccgtgcaaccgatcgcggacgtg
gggcgcatcgcacgcgaacacgatctgctgttcctcgtggacgcagctcaaaccgcgggc
gcgtttccgctcgacatccaggccgcgaacatcgacctgctcgcgttcccggggcacaag
tcgctgctcgggccgaccgggtccggcgctctgttcgtcggtccgcgtgccacgctgcgt
ccgtggcgcgagggcgggaccggcggagactcgctcacgcccacgcagccgaccgacttt
ccgcaccacctcgaaggcggcacgccgaacgtgctcggcgtcgtcggactgatcgcgggg
ctggatttcgtggaagagaagggcgtcgaggcgatccaccggcacgaacaggcgctctgc
gagcggctccgtgctgcgctggtcgaattgcccggcttcgagcttttcgggcacgcggac
cccgcgcgaagggtgagcgcactcagcttccggtgcgaggtgctcgccgcgccggaactc
gcgggactgctcgatcagtcgttcaacattgccgttcgacccgggctgcactgcgccccg
tacatacacaaggctctcggtaccgcacccgacggcctcgtgcgagtcagccccggtgcg
ttcaacaccgaagccgacatcgaccacctcgttgacgcgctgaagcagatcaccggcacc
gtgtga
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