KEGG   Gemmata sp. SH-PL17: VT84_29810
Entry
VT84_29810        CDS       T04358                                 
Symbol
csd_3
Name
(GenBank) putative cysteine desulfurase
  KO
K11717  cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
Organism
ges  Gemmata sp. SH-PL17
Pathway
ges00450  Selenocompound metabolism
ges01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ges00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    VT84_29810 (csd_3)
Enzymes [BR:ges01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.1  Sulfurtransferases
    2.8.1.7  cysteine desulfurase
     VT84_29810 (csd_3)
 4. Lyases
  4.4  Carbon-sulfur lyases
   4.4.1  Carbon-sulfur lyases (only sub-subclass identified to date)
    4.4.1.16  selenocysteine lyase
     VT84_29810 (csd_3)
SSDB
Motif
Pfam: Aminotran_5 DegT_DnrJ_EryC1 Beta_elim_lyase Cys_Met_Meta_PP Pyridoxal_deC
Other DBs
NCBI-ProteinID: AMV28638
UniProt: A0A142XNM7
LinkDB
Position
complement(7014377..7015522)
AA seq 381 aa
MIYLDNAATSFPKPESVYVAMDRFARTSLANPGRSGHKMALESEHALSDARHRLNRFFNG
RDADRWAFTLNCTDALNMAFKGVLNDGDHVITTDLEHNSVSRPLVALAQAGRITLTRVPA
DAGGSIDPEAIRAAIGPKTRLIAMTHASNVLGTVQPIADVGRIAREHDLLFLVDAAQTAG
AFPLDIQAANIDLLAFPGHKSLLGPTGSGALFVGPRATLRPWREGGTGGDSLTPTQPTDF
PHHLEGGTPNVLGVVGLIAGLDFVEEKGVEAIHRHEQALCERLRAALVELPGFELFGHAD
PARRVSALSFRCEVLAAPELAGLLDQSFNIAVRPGLHCAPYIHKALGTAPDGLVRVSPGA
FNTEADIDHLVDALKQITGTV
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgatctacctcgataacgccgcgaccagtttcccgaagccggagagcgtgtacgtcgcg
atggaccgcttcgcgcggacctcgctcgccaaccccgggcgctccgggcacaagatggcg
ctggagtccgagcacgcgctgtccgacgcccggcaccggctcaaccgcttcttcaacggg
cgcgacgcggaccgctgggcgttcacgctcaactgcaccgacgcgcttaacatggcgttc
aagggcgtgctgaacgacggcgaccacgtcatcaccaccgacctcgaacacaacagcgtg
tcgcgcccgctcgtcgcgctcgcccaggcggggcgcatcacgctcactcgcgtgccggcc
gacgcgggcgggagcatcgacccggaagcgatccgcgccgcgatcgggccgaagacccgg
ctcatcgcgatgacgcacgcgagcaacgtgctcggcaccgtgcaaccgatcgcggacgtg
gggcgcatcgcacgcgaacacgatctgctgttcctcgtggacgcagctcaaaccgcgggc
gcgtttccgctcgacatccaggccgcgaacatcgacctgctcgcgttcccggggcacaag
tcgctgctcgggccgaccgggtccggcgctctgttcgtcggtccgcgtgccacgctgcgt
ccgtggcgcgagggcgggaccggcggagactcgctcacgcccacgcagccgaccgacttt
ccgcaccacctcgaaggcggcacgccgaacgtgctcggcgtcgtcggactgatcgcgggg
ctggatttcgtggaagagaagggcgtcgaggcgatccaccggcacgaacaggcgctctgc
gagcggctccgtgctgcgctggtcgaattgcccggcttcgagcttttcgggcacgcggac
cccgcgcgaagggtgagcgcactcagcttccggtgcgaggtgctcgccgcgccggaactc
gcgggactgctcgatcagtcgttcaacattgccgttcgacccgggctgcactgcgccccg
tacatacacaaggctctcggtaccgcacccgacggcctcgtgcgagtcagccccggtgcg
ttcaacaccgaagccgacatcgaccacctcgttgacgcgctgaagcagatcaccggcacc
gtgtga

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