Gemmata sp. SH-PL17: VT84_31030
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Entry
VT84_31030 CDS
T04358
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VT84_31030 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ges03019
]
VT84_31030 (pnp)
03016 Transfer RNA biogenesis [BR:
ges03016
]
VT84_31030 (pnp)
Enzymes [BR:
ges01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
VT84_31030 (pnp)
Messenger RNA biogenesis [BR:
ges03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VT84_31030 (pnp)
Transfer RNA biogenesis [BR:
ges03016
]
Prokaryotic type
tRNA degradation factors
VT84_31030 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
S1_RRP5
KH_5
Motif
Other DBs
NCBI-ProteinID:
AMV28868
UniProt:
A0A142XPA0
LinkDB
All DBs
Position
complement(7276514..7278772)
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AA seq
752 aa
AA seq
DB search
MPVNPARVECQFGGRTLTLETGKFAKQAHGAVLVTHGETSVLVAAVEGTPIPGRDFFPLQ
VEYRERTYAAGKFPGGFIKRETRPSTKETLTSRLIDRPSRPLFPTNYFNEVQIHCTVISS
DRENDADMLALIGTSAALHVSHIPFLKPYGGLRLGRVNGELIVLPTVTQMEESDLDLIVA
ATRDAVCMIEGFAREMPEQEVGDAIMEAHKQCAVLIDLIERLRTEAGLEPKVLPPATPDN
PLAEELYAKYGTTYREKYLTKGKKERNAALDELKDEVKKVYVPEGELNPKWTSSQVSSAL
GVLRERVFREITLGGTRIDGRAPKELRSISGEVAVLSRTHGTAVFQRGETQALVVATLGT
VADEQKVDGLQDEYSKKFFLDYNFPPYSVGECKPIRAPGRREIGHGMLAERSLKAVIPPP
ARFPYTIRLVSEILESNGSSSMASVCGGTLALMDAGVPIKRPVAGISVGLVMDKEEFTLL
TDIQGDEDHYGDMDFKVAGTQKGVTGIQLDIKVDGINEAIVRGALEQAKEARLQILKVML
AALPAPRKEISRWAPRLIQLKINPEMIGKLIGPGGKMIRAIQEETGAKIDIEDDGTVSIA
SADAESVEAARRMVEGLTAEVKVGAVYDGKVISLKEFGAFIEIAPGRDGLCHVSELDSGF
VQRPEDVVQVGDKVQVKVIAIDDQGRVKLSRKALLAPREDDGSGGGYSDRGGDRGDRGDR
GGDRDRGDRGDRGGRGGDRGGRGGPRGGGRRD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgccggttaatccagctcgtgttgaatgtcaattcggcggtcgtactctcaccctcgaa
accgggaagttcgctaagcaggctcacggggccgttctcgtcacccacggggaaacgtcc
gttctggtggccgcggtcgaagggacaccgatcccgggtcgcgacttcttcccactccag
gtcgagtaccgcgaacgcacctacgccgcgggtaagttccccggcgggttcatcaagcgc
gaaacgcgcccgagcactaaagaaacgctcacgtcccgccttatcgaccgcccctcgcgc
ccgctgttccccacgaactacttcaacgaagtgcagatccactgcaccgtcatctcgtcc
gaccgagagaacgacgcggacatgctcgccctcatcgggacgagtgccgcgctgcacgtt
tcgcacatcccgttcctgaagccttatggaggcctccggctcgggcgcgtgaacggcgaa
ctcatcgtgctccccaccgtcacccagatggaagagagcgacctcgacctgatcgtggcc
gccacacgcgacgcggtgtgcatgatcgagggtttcgcccgcgagatgcccgaacaggaa
gtgggtgatgcgatcatggaagcgcacaagcagtgcgccgtcctgatcgacctcatcgaa
cgcctccgcaccgaagcgggcctggagcccaaggtgctgccccccgcgacgccggacaac
ccgctggcggaagagctttacgcgaagtacggcaccacctaccgcgaaaagtacctgacg
aagggcaagaaggagcggaacgcggcgctcgacgaactcaaggacgaagtgaagaaggtt
tacgtgccggaaggcgagctgaacccgaagtggacctcgtcgcaagtgtcgagcgcgctg
ggcgtgctgcgcgagcgcgtgttccgcgagatcacgctcggcggcacccgcatcgacggc
cgcgcccccaaggaactccgctcgatctcgggcgaggtcgcggtgctgtcccgcacccac
ggcacggccgtgttccagcgcggcgaaacgcaagctctcgtcgtcgccaccctgggcacc
gtcgccgacgaacagaaggtggacgggctccaggacgagtactcgaagaagttcttcctc
gactacaacttcccgccgtactcggtcggtgagtgcaagccgatccgcgccccgggccgc
cgcgaaatcggccacgggatgctcgccgagcgctcactgaaggccgtcatcccgccgccc
gcgcggttcccatacacgatccgcctcgtgtccgaaatcctcgagtccaacggctcgtcc
agcatggcgagcgtgtgcggcggcaccctcgcactcatggacgcgggcgtgccgatcaag
cgcccggtggccgggatctccgtcggcctcgtgatggacaaggaggagttcacgctcctg
accgacatccagggcgacgaggaccactacggcgacatggacttcaaggtggccggcacg
cagaagggcgtcaccggtattcagctcgatatcaaggtggacggcatcaacgaggcgatc
gttcgcggcgccctcgaacaagcgaaagaggcccggctccagatcctcaaggtgatgctc
gcggcgctcccggccccgcgcaaggaaatcagccggtgggcaccgcggttgatccaactg
aagatcaacccggaaatgatcggcaagctgatcggccccggcgggaagatgatccgcgcc
atccaggaagaaacgggcgcgaagatcgacatcgaggacgacggcaccgtgtcgatcgcg
tcggccgacgccgagagcgtggaagccgcccgccgcatggtggaggggctcacggccgaa
gtgaaggtcggcgcggtgtacgacggcaaagtgatttcgctcaaggagttcggcgcgttc
atcgaaatcgcgcccggacgagacgggctgtgccacgtctccgaactcgactcagggttc
gtccagcgccccgaggacgtggtccaggtcggcgacaaggtccaggtgaaggtgatcgcc
atcgacgaccagggccgcgtgaagctctcgcgcaaggcgctgctcgctccgcgtgaggac
gacggcagcggtggcggttacagcgatcgaggtggggaccggggcgatcgcggagaccga
ggcggagaccgtgaccggggcgatcgtggggaccgcggtgggcgcggcggcgatcggggc
gggcgcggtggaccgcggggcggcgggcgccgcgactaa
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