Gemmata sp. SH-PL17: VT84_31095
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Entry
VT84_31095 CDS
T04358
Symbol
metC
Name
(GenBank) Cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00260
Glycine, serine and threonine metabolism
ges00270
Cysteine and methionine metabolism
ges00450
Selenocompound metabolism
ges00670
One carbon pool by folate
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01230
Biosynthesis of amino acids
Module
ges_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VT84_31095 (metC)
00270 Cysteine and methionine metabolism
VT84_31095 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
VT84_31095 (metC)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VT84_31095 (metC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ges04147
]
VT84_31095 (metC)
Enzymes [BR:
ges01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
VT84_31095 (metC)
Exosome [BR:
ges04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
VT84_31095 (metC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Met_gamma_lyase
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
AMV28881
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All DBs
Position
7290103..7291263
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AA seq
386 aa
AA seq
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MSTDHAQGFSTRAIHAGQDADPATGATVVPIYATSTYTQAAPGQHKGYEYSRSGNPTRTA
LETALASLEEGERGLAFASGLAATTAVFGALLRPGDEVVASADLYGGTFRLLDKVFKPWG
LVAKYTDDSSAAGFEKLITPKTKLVWIETPTNPLLQVLDIAALAEVSHKHGAKLAVDNTF
ASPYLQRPLRLGADLVIHSTTKYLGGHSDVVGGCVVGAKDLLDPIKFYQNAAGGVPGPFD
SYLVLRGLKTLSVRMDRHCANAMELAPWLKAHPAVAKVYYPGLADHPGHTVAAKQMKSFG
GMISLKLHGGIPAAQLFLTRTKLFSLAESLGGVESLVCHPTTMTHASIPKDVREARGVDD
GLIRLSVGIEDVADLRADLERALTTA
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgatcacgcgcaggggttcagcacgcgggccattcacgcggggcaggacgcg
gaccccgcgaccggggcgaccgtcgtgccgatctacgcgacgagcacctacacgcaggcc
gcgccgggccagcacaagggctacgagtacagccgcagcgggaaccccacgcgcacggcg
ctcgaaacggccctcgcctctctcgaagaaggcgagcgcgggctcgcgttcgcgtcgggg
cttgctgccacaactgcagtgttcggggcgctcctgcggcccggggacgaagtcgtcgcg
tccgcggacctctacggcggcacgttccggttgctcgacaaggtgttcaagccctggggc
ctggtcgcgaaatacaccgacgattcttcggccgcgggcttcgagaaactcatcacaccg
aagacgaagctcgtctggatcgaaacgccgaccaacccgctgctgcaagtcctcgatatc
gccgcgctcgccgaagtgagccacaagcacggggccaaactcgcggtcgataacacgttc
gcgtcgccgtacttgcagcgcccgctccggctcggcgcggacctcgtgatccacagcacg
accaagtacctcggcgggcactcggacgtggtgggcgggtgcgtggtgggcgcgaaagac
ctgctcgacccgatcaaattctaccagaacgcggccggcggggtgccgggaccgttcgac
tcgtacctcgtgctccgtgggctgaaaacgctgagcgtccgcatggaccgccactgcgcg
aacgcgatggagcttgccccctggctgaaggcgcacccggccgttgccaaggtttactac
ccggggcttgccgaccaccccgggcacacggtcgcggcgaaacagatgaagtcgttcggc
gggatgatctcactgaagttgcacggcggcatccctgccgcacagttgttcctcacgcgc
acgaaactctttagtttggcggagagcctgggcggtgtggagtcgctcgtgtgtcaccct
acgacgatgacgcacgcgagcatcccgaaggacgtgcgcgaggcccgcggcgttgacgac
gggctgattcggctgagtgtggggatcgaggacgtggccgacctgcgtgccgacctcgaa
cgtgctctcaccacggcgtaa
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