Gemmata sp. SH-PL17: VT84_31385
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Entry
VT84_31385 CDS
T04358
Symbol
rpoA_2
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VT84_31385 (rpoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ges03021
]
VT84_31385 (rpoA_2)
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_31385 (rpoA_2)
Enzymes [BR:
ges01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VT84_31385 (rpoA_2)
Transcription machinery [BR:
ges03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VT84_31385 (rpoA_2)
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VT84_31385 (rpoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
AMIN-like
RAD51D_N
SupH-like_C
Motif
Other DBs
NCBI-ProteinID:
AMV28939
UniProt:
A0A142XPI7
LinkDB
All DBs
Position
complement(7356825..7357832)
Genome browser
AA seq
335 aa
AA seq
DB search
MRVRWRGLELPSRVQADRSTLTDVYGKFHAEPFEKGFGMTLGNSLRRILLSSLEGSAITR
VKIQGVQHEISTITGVVEDVTDIILNVKSLVVKNLSDQPKTIRIQKHEAGSVRGVDVQHD
ESIQIINPEHHIATLTSDVPFVMEMTVENGRGYRTADDNAGKEREVGVIPVDSSFSPVVR
VKYDIEETRVGQKTNYDRLVMEIWTNGTLAPQMAVVEAAKILRKHLNPFVQYTEPGPELQ
LDEPIEIGPNASVADAANAELERKLNMSLAELDLSVRATNCLETEGIQTVRDLVIRSPEE
LLEVRNFGETTLREVKSKLEERGLALGMRIPPRRG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttcgctggcgcggactagaactgccgagtcgggttcaggccgaccgctccacc
ctcaccgacgtctacgggaagttccacgccgaaccctttgaaaagggcttcgggatgacc
ctcgggaacagcctccgccgcatcctgctctcgagtctcgagggcagcgcgatcacgcgg
gtgaagatccagggcgtgcagcacgagatctcgaccatcaccggcgtggtggaagacgtg
acggacatcatcctgaacgtcaagagcctcgtggtgaagaacctctcggaccagccgaag
acgatccgcattcagaagcacgaggccggctcggtgcgcggcgtcgacgtgcagcacgac
gaatcgatccagatcatcaaccccgagcaccacatcgcgacgctgacgagcgatgtgccg
ttcgtgatggagatgacggtcgagaacgggcgcgggtaccgcaccgccgacgacaacgcc
ggtaaggagcgcgaggtcggggtgatcccggtcgactcgagcttctcgccggtcgtccgg
gtgaagtacgacatcgaagaaacccgcgtcggtcagaagacgaactacgaccggctcgtg
atggagatctggaccaacggcacgctcgccccgcaaatggcggtggtcgaagcggccaag
atcctccgcaagcacctgaacccgttcgtgcagtacacggagccggggccggaactgcaa
ctcgacgagccgatcgagatcgggccgaacgcctccgtcgcggacgcggccaacgccgaa
ctcgagcgcaagctgaacatgagcctcgccgaactcgatctgtcggtgcgggcgacgaac
tgcctggaaaccgaaggcatccagacggtccgcgatctcgtgatccggtcgcccgaggaa
ctgctcgaggtccgtaacttcggcgaaacgaccctgcgcgaagtgaagtccaagctcgaa
gaacgcggcctggcactcgggatgcgaatcccgccgcgccgcggatag
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