Gemmata sp. SH-PL17: VT84_32310
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Entry
VT84_32310 CDS
T04358
Name
(GenBank) Uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VT84_32310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ges03400
]
VT84_32310
Enzymes [BR:
ges01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
VT84_32310
DNA repair and recombination proteins [BR:
ges03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VT84_32310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AMV29123
LinkDB
All DBs
Position
complement(7568983..7569744)
Genome browser
AA seq
253 aa
AA seq
DB search
MSADGAVDLVQQVRAHLESLRAAGVLLVPRGERLAPRRLVAPPIFVAPVEAVPNAPNPIE
TRRQELTVLAKEIENCDKCSELFAVRTQPVFGAGPLDPEVAFVGDAPGSEEDAQGEPFVG
KGGQLLRRIIAACQLPSSQEYLLNIIKCRPPRNRAPTMAECGNCRDFFRRQFELVNPKYV
VALGLTAAKLLTGKNLTMSALRGQVHEYRGVPLICTHHPNDIEKDATERVKRETWEDMKL
LLRTMGRSVPGAK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggacggtgcggttgatctggttcaacaggtgcgggcgcacctcgaatcgctt
cgtgcggcgggagtattgctcgtaccgcgtggcgagcgtctcgctccccgtcgcctcgtt
gcaccgccgatatttgttgcgcccgttgaggccgtgccgaacgcacccaacccgatcgaa
acgcggcgccaggaactaaccgttctcgcgaaagaaatcgagaactgcgacaagtgcagc
gaactgttcgcggtccgcacgcaaccggtgttcggggccgggccgctcgacccggaggtc
gcgttcgtcggggatgctcccgggtccgaagaggacgcgcagggcgagccgttcgtcggt
aagggcgggcagttgcttcggcgcattattgccgcgtgccagttgccgtcgtcgcaagag
tacctgctcaacatcatcaagtgccggccaccgcggaaccgcgcgccgacgatggcggag
tgcggaaactgtcgcgacttcttccgccgacagttcgagctggtgaaccccaagtacgtc
gttgcgctggggctcacggcagcgaagctactgaccggaaagaacctcacgatgagcgcg
ctgcgcgggcaggttcacgagtaccgcggggtgccgctgatttgtacgcaccacccgaac
gacatcgagaaggacgcgaccgagcgagtgaagcgcgagacgtgggaggacatgaaactg
ctactgcgcacgatgggccggtcggtgccgggcgcgaagtag
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