Gemmata sp. SH-PL17: VT84_35205
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Entry
VT84_35205 CDS
T04358
Symbol
sucD
Name
(GenBank) Succinyl-CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
ges
Gemmata sp. SH-PL17
Pathway
ges00020
Citrate cycle (TCA cycle)
ges00640
Propanoate metabolism
ges00660
C5-Branched dibasic acid metabolism
ges00720
Other carbon fixation pathways
ges01100
Metabolic pathways
ges01110
Biosynthesis of secondary metabolites
ges01120
Microbial metabolism in diverse environments
ges01200
Carbon metabolism
Module
ges_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ges_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VT84_35205 (sucD)
00640 Propanoate metabolism
VT84_35205 (sucD)
00660 C5-Branched dibasic acid metabolism
VT84_35205 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
VT84_35205 (sucD)
Enzymes [BR:
ges01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
VT84_35205 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AMV29696
LinkDB
All DBs
Position
8193774..8194688
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AA seq
304 aa
AA seq
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MSILVDKSTRVICQGITGSAGSFHTDQCLLYGSQFVGGVTPKKGGTTWKGEKSEKSLPVF
NTVAEAVKATGATASMIFVPPGGAADAIMEAADAGVTLIVAITEGIPVLDMARAKRYLQT
KPGVRLVGPNCPGVITPGQCKIGIMPGHIHKPCGAGEKGIGVISRSGTLTYEAVFQLTAL
GLPQSTCVGIGGDPVIGTNQIELLEMFENDPQTSAILMIGEIGGTAEEAAAEFVAKHVKK
PVAAFIAGQTAPPGRRMGHAGAIISGGSGSAADKIAALEKAGIEVAPTPADLGSAVQKAI
AKKK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctcgtcgacaagtccacccgcgtcatctgccagggcatcaccggctcggcc
gggagcttccacaccgaccagtgcctgctgtacgggtcgcagttcgtcggcggggtcacg
cccaagaagggcggcacgacgtggaagggcgagaagtcggaaaaatcgctcccggtgttc
aacaccgtggccgaggcggtgaaggcgaccggcgcgaccgcgagcatgatcttcgtcccg
cccggcggcgcggccgacgcgatcatggaggccgcggacgcgggcgtcacgctcatcgtt
gccattaccgaaggcattcccgttctggacatggcccgcgcgaagcgctacctgcagacg
aagcccggcgtgcggctcgtcgggccgaactgccccggcgtaatcaccccgggccagtgc
aagatcggcatcatgccggggcacatccacaagccctgcggcgcgggcgaaaagggcatc
ggcgtcatcagccggtccgggacgctcacctatgaggccgtgttccagctcaccgccctg
gggctgccgcagagcacctgcgtcgggatcggcggcgatccggtgatcggcacgaaccag
atcgaactactggagatgttcgagaacgacccgcagacgtccgcgatcctgatgatcggt
gagatcggcgggaccgcggaagaggccgcggccgagttcgtggcgaaacacgtgaagaag
ccggtggcggcgttcatcgcgggccagacggctcccccgggccggcgcatgggccacgcg
ggcgcgatcatctccggcggcagcggcagcgcggccgacaagatcgcggcactggagaag
gccggcatcgaggtcgcccccacgcccgccgatctgggcagcgccgtacaaaaggcgatc
gcgaagaagaaataa
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