Gemmata sp. SH-PL17: VT84_36500
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Entry
VT84_36500 CDS
T04358
Name
(GenBank) Tetratricopeptide repeat protein
Organism
ges
Gemmata sp. SH-PL17
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_8
TPR_11
TPR_14
TPR_MLP1_2
Apolipoprotein
TPR_19
ATG16
HemY_N
TPR_9
Motif
Other DBs
NCBI-ProteinID:
AMV29951
UniProt:
A0A142XSN3
LinkDB
All DBs
Position
8496247..8501388
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AA seq
1713 aa
AA seq
DB search
MSNPNDPNQPSPPDQSDPNAKNPQSDAPTEGGYRSGGSSFEFQLPDEGSEPLPIPEPDAN
VSRSDFGLPPIPEGAPGVKSPFGSRGSFGDFGLEPQANNPAGSDSADGTFLLPDLPPQPH
ADDSAVLFDPTASLAAPGAAGMQPLEPANLPDVSSLYPPVDPAHGALPDIPARAPSSVEI
DLGAAEIDALGGPLPIPPGSDSMEIPIADLDSSAALGGGGYVPLGSDPDIFGLDELPLAD
ADPADISGLDQAPGASGGKEGESVVALGALAPTNDPSSFSLGSVQLPAAAPDTEPSGSSG
SVPDVKGLFPTGSGSSGSTPSLPSIVPPGYQRGGSSFEFQLPEGVDSVSDLPPIPGPDAN
ESNTHAALPPKPIARPVDASFDFINVSGSRSLVDIGTEGKVIAPAEPDTPPPAVDSKVPL
GDAEPIQPVKPASGWLDSGTNAEEIPAAELVDAGPEVIENSNIFTGAPVPTAEAVDAEIE
IDPEPLIGAEQSDVALTFDPADDGTMQDGGASDLLVAAELADGGTEILDSERVDAESIHD
MPAPALDHQLFDSATLAHTPDLPGAPHTDATDYGANPAYDADASSILADHTEVQPGPQDE
SSVRVEAPGVDRTLSVRPADGFDLTVSDEPVPAGLFDDAEDAEDWRDQSGSNLLDQDHTA
PEFDLEDLVASSQADDDGPPSLSSAPSSIFSGLKSPFADSGNVDDSAGAKPGSQAPPNAD
DVAEFTDEPELDATVVRPKATEPDAKRSSANFQLPDADSSDGSVDWGDAALAGDEDATRA
ARDGVSLSSILRGELPDDSAEMPTRSTGAIDPSQTAPTREPVVSVDWLSGSAEGSAVSES
VKAKPGTKEKGKDKDRKAAPAPTSKTKPNKDSDAGTGSGTSPVAPEKKAKPAKKGGSGMA
AGLLIGALAAGGAWAGVYFGGVIPNEKKAQFAPGGPPGGPLPGGPGGPGGPGGPFGPGGP
GGPPAGFPPAAAPVDPQAAFAAGDTATALEHFKNSPPTSTVDKANSGPIRVFARVQALKD
GTTVPANDADLKVARDELEAVLADVPALTEPGGVKRAVKAAVALGVSHEVVGDTKTARKV
YTDAMAKYPAYKATFEALLDKLNALEAPSPAGTSRRLDPADAERILFASTLLLQDAPQSE
APEPGVFYWKAVNLAAGGKYTEAVDQITKAKAAHAARAKASAGRGLNPLSDPLEQIFTRS
CDELKAYWELRGSIYGNPALAATIKKDGLAKAIEKLLGAEKDVTAARGMVTTLTAEVAKL
DKEAKTAEKGKTEAEEKLKTAAVDLKTAEKKLETAMAELKTAEKDVKDQKDVLASLVEAL
KPVTPIPDKWGPADVLAATKSVASRVTGPDLKALVPNSMVAIGGGGLSTGQLLDIAERLS
KAEGSTKIVAAKLEAETKRLTDKYDTDTKKLKDDHSAALKKLADDYTAETKKLKDGSGEE
LKKLTDKFAADAKKLTDEHAASVTKLNEAHTLALKEEQARTEAEKKKFVQREIEFQKQLV
NSITPGQVMDIWLPVLTELRRPADSEPALSAAEKAITGSVPESEDAAKARTVAGMAYLIK
GDLANAKAMFEAARRSPAYKTAAGKPWTRAADQGLAAVADPVALYRQPVADRTTDPRAAA
VALDAGIAAYKSGRYDAAVKALLDATKNDPTDPVVWYFLGATRWALGEDEQAKKDFAQGA
ERERASLLPNRTLSAALAPIQGSGRNALDRARP
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccaacgatccgaaccagccatcgccccccgatcaatccgacccgaacgcg
aaaaatcctcagtccgatgcgcccacggagggcgggtaccggagcggtgggtcgtcgttc
gagttccagttgccggacgagggcagtgagccgctgccgattccggaaccggatgccaac
gtcagccggtcggacttcggactgccaccgataccggaaggcgcaccgggggtgaaaagc
ccgttcggtagccgcgggtcgttcggcgatttcggcctggaaccgcaggccaacaacccg
gccgggtcggattcggccgacggcacgttcctgctcccggacctgcccccacagccccac
gcggacgactcggccgttctgttcgaccccacggcctcactcgcggccccgggcgcggcc
ggaatgcagccgctcgaaccggccaacctaccagacgtatcgagcctgtacccgcccgtt
gacccagcacacggcgcgctcccggacatcccggcccgggcgccgagcagcgtcgaaatc
gatctcggtgcggccgagatcgatgccctgggggggccgctcccgatccccccggggagc
gattcgatggagatcccgatcgcggacctggactcgtcggccgcgctcggtggcggcggg
tacgtgccgctcggctcggacccggacatcttcggactggacgagttgccgctggccgat
gcggacccggccgacatatccgggctggaccaagcgccgggcgcgtccggtgggaaagag
ggcgagtcggtagtcgcgctgggtgccctcgccccgaccaacgacccgtcgtcgttctcc
ctcggttcggttcaactgcccgccgcggcgcccgatacggagccgagcggttcgtcgggc
agcgtgccggacgtaaagggcctgttcccaacgggctccggctcctccggttccactccg
tcgctcccgtcgattgtgcccccggggtaccagcgcggcggctcgtcgttcgagttccag
ctcccggaaggggtggactcggtcagtgatttgccgccgatccccgggccggacgccaac
gagtccaacacgcacgccgcgctgccgccgaagccgatcgcgcgcccggtcgatgcgtct
ttcgatttcattaacgtttccggctcccggtcactcgtcgacattggcactgaaggcaag
gtgattgcgcccgcggagccggataccccgccgcccgcggtcgactcgaaagtgccgctg
ggagacgcggagccgattcagccggtcaagcccgcgtccgggtggctcgattcgggcacg
aacgcggaagaaatcccggccgcagaactggtcgacgccggccccgaggtgatcgaaaac
tcgaacatcttcaccggcgcgcccgtgcccacggccgaggcggtggacgccgaaatcgaa
atcgatcccgagccactgatcggggccgagcagtccgacgtcgcgctcacgttcgatccg
gcggacgacggcaccatgcaggacggcggggcgagcgacctgctggtggccgcggaactg
gcggacggcggaacggaaattctggattcggagcgggtggacgccgagtccattcacgac
atgcccgcaccggcgctggatcatcaactgttcgattccgcgaccctcgcgcacacgccc
gacctgcccggcgcgccgcacacggacgcgaccgattacggcgcgaacccggcctacgac
gccgatgcgtccagcatcctcgccgatcacaccgaagtccagcccggaccgcaggacgag
tcctcggtgcgcgtggaggcgcccggcgtggaccggaccctgagcgtcaggccggcggac
ggcttcgatctgacggtctcggacgagccggtcccggccgggctgttcgacgacgcggaa
gacgccgaggactggcgcgaccagagcgggtcgaacctgctcgaccaggaccacaccgcg
ccggaattcgacctggaagatctggtcgcatcgagtcaggcggacgacgacggcccgccg
tcgctctcgtcggccccgtcgagcatcttctccgggctgaaatccccgttcgccgattcg
ggcaacgtggacgattccgcaggcgcgaagcccggctctcaggctcccccgaacgccgac
gatgtggccgaattcacggacgagcccgaactggacgcgacggtcgtgcgccccaaggcg
accgaaccggacgcgaagcggagttccgcgaacttccagttgccggacgcggactcgtcg
gacgggtccgtcgattggggcgacgcggccctcgccggggacgaagacgcgacccgggcc
gcgcgcgacggggtctcactgtcctcgatcctgcgcggcgagttgccggacgattcagcc
gaaatgccgacgcggagcaccggagcgatcgatccgtcccaaacggccccgacccgcgaa
ccggtcgtcagcgtggactggctctccgggtccgctgaaggctcggccgtttcggaatcc
gtgaaggccaagcccggaacgaaggaaaaggggaaagacaaggaccgaaaggccgccccc
gcaccaacgagcaagaccaaacccaacaaggacagcgacgcgggtactggttcagggact
agccccgtggcacccgagaaaaaagccaagcccgcgaaaaagggcggaagcggcatggcc
gcggggttgctcatcggcgcgctggcggccggtggcgcgtgggccggggtctacttcggt
ggcgtgattccgaacgaaaagaaagcgcagttcgcccccggtggacctcccggtgggccg
ctaccaggcggtcccggtgggccgggcggaccgggtggaccgttcggtcccggtggaccg
ggcggcccgcccgccgggttcccgcccgccgcggcgcccgtggacccgcaagccgcgttc
gcggcgggggacaccgcaacggcgctcgaacacttcaagaacagcccgccgaccagcacg
gtcgataaggccaattctggccctattcgggtgttcgcgcgggtacaggctctcaaggac
gggacgaccgttccggccaacgacgcagatctgaaggtcgcacgcgacgaactcgaagcg
gtgctcgctgacgtgccggcactcacggaaccgggcggcgtgaagcgcgcggtgaaagcc
gcggtagcactcggggtttcgcacgaggttgtgggcgacaccaagaccgcgcgcaaggtg
tacaccgacgcgatggccaagtaccctgcgtacaaggccaccttcgaggcgctcctcgac
aagctcaacgcgctcgaagccccgagtcccgcgggtacgtcccggcggctcgatccggcc
gacgcggagcgcattctgttcgcgtccacgctgttgctccaggacgccccgcaaagcgaa
gcccccgaaccgggcgtgttctactggaaggccgtgaacctcgcggccggtggtaagtac
acggaagccgtcgatcagatcacgaaggcgaaggccgcgcacgcggcgcgggcaaaggcg
agcgccgggcgcgggctgaacccgctctccgacccgctcgaacagatcttcacccgctcc
tgcgacgaactgaaagcgtattgggagctgcgcgggtccatttacggtaaccctgcactg
gctgcgacgatcaagaaagacgggctcgcaaaggcgatcgagaagctcctgggcgccgag
aaggacgtgaccgcggcgcgcggcatggtgacgacgctcacggccgaagtcgcgaagctc
gacaaagaagcaaagaccgccgagaagggtaagaccgaagccgaagagaaactgaaaact
gctgccgtcgatctgaagaccgccgagaagaagctcgaaaccgcgatggcggaactgaaa
acggccgagaaggacgtcaaggaccagaaagacgtgctcgcctcgctggtggaagcgctg
aagccggtgacgccgatcccggacaagtgggggccggcggacgtgctcgcggcgacgaag
tccgtggcgtcgcgcgtgaccgggccggacctgaaggcgctcgttcccaattcgatggtc
gccatcggtggcggcgggttgtccaccggtcagttgctcgatatcgccgagcggctcagc
aaggccgaaggctcaacaaagatcgtggccgccaaactcgaagcggaaacgaagcggctc
accgacaagtacgacaccgacaccaagaaactcaaggacgaccactcggcagcgctcaag
aaattggccgacgactacacggccgaaacgaagaaactgaaggacggcagtggagaggaa
ctcaagaagctcaccgacaagttcgcggccgacgcgaagaagctgaccgacgagcacgcc
gcgtccgtcaccaagttgaacgaggctcacacgctcgcgctgaaggaagaacaagcccgg
actgaagctgagaagaagaaattcgtgcagcgcgagatcgaattccagaagcagttggtt
aactcgattacgccggggcaggtgatggacatctggctgcccgtgttgaccgaactccgg
cgcccggccgacagcgagccggcactgtccgcggccgagaaagcgataacagggtcggtt
cccgaatccgaggacgcggcgaaggcccgcactgtggcggggatggcgtacctgattaag
ggcgatctggcgaacgcgaaagcgatgttcgaggccgcccggcgcagtccggcctacaag
accgcggcgggcaagccgtggacacgcgccgcggaccaaggactggcagcggtggccgac
ccggtcgcgctgtaccgccagccggtcgcggaccggaccaccgatccgagagcggctgcg
gtggcgctggacgcgggcatcgcggcgtacaagtcagggcgctacgatgctgcggtgaag
gcgctgctcgacgccacgaaaaacgacccgaccgacccggtcgtgtggtacttcctgggt
gcgacccgctgggcgctgggtgaggacgagcaagcgaagaaggacttcgcccaaggcgcg
gagcgcgaacgagcgtcgttgctcccgaaccgcacgctgagcgcagccctcgcaccgatc
caaggatcgggccgcaacgccctcgaccgtgcccggccgtaa
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