Gemmata sp. SH-PL17: VT84_38000
Help
Entry
VT84_38000 CDS
T04358
Symbol
rsmH_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
ges
Gemmata sp. SH-PL17
Brite
KEGG Orthology (KO) [BR:
ges00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ges03009
]
VT84_38000 (rsmH_1)
Enzymes [BR:
ges01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
VT84_38000 (rsmH_1)
Ribosome biogenesis [BR:
ges03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VT84_38000 (rsmH_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_31
Methyltransf_11
FtsJ
PCMT
Methyltransf_19
Methyltransf_12
HHH_6
HHH_3
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AMV30248
LinkDB
All DBs
Position
complement(8807018..8807905)
Genome browser
AA seq
295 aa
AA seq
DB search
MSTDRAPVHVSVLPAETLTLLDPQAGQTWIDCTVGGGGHTRLLAERVGPTGRVIGLDQDP
TMLELARSRLAGLPVELVHANFDQLGEVLTARGLERVDGVLADLGFSSDQLGEKARGLSF
REDGPLDMRLDPTAGATAADMVNTMSEAGLADTFWEFGEERHSRRVAKRIVERRAHQPFT
TTADFANVVRSCVPRSGSIDPATRVFQALRIAVNDELGALDRLLAMLPRVVKVGGAAGII
SFHSLEDRRVKQVFREPTVWQQVTKKPVEAGDEETARNPRARSAKLRVARRVGDR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaccgcgccccggttcacgtcagcgtgttaccggccgaaacgctcaccctg
ctcgatccacaagcgggccaaacgtggattgactgcaccgtcggtgggggcgggcatacg
cgcctgctggccgaacgtgtcggcccgaccgggcgcgtcatcgggttggaccaagacccg
accatgctcgaactggcccgttcgcgcctggcggggttacctgttgaactggtccatgcg
aacttcgaccagctcggcgaagtgttgaccgcacgaggtcttgagcgcgtcgacggcgtg
cttgcggacctgggctttagctcggaccaattgggcgaaaaagcacgcggactgagtttc
cgcgaggacgggccgctcgacatgcgactggatccgaccgcgggcgcgacggcggccgac
atggtgaacacgatgagcgaggcggggctcgcggacacgttctgggagttcggtgaagaa
cggcacagtcgaagggtcgcaaagcgcatcgttgagcgccgggcacaccaacccttcact
accaccgcggatttcgcgaacgtcgtgcggagttgcgtaccgcgatcggggagcatcgat
ccggccacgcgcgtgttccaggctctgcggatcgcggtgaacgacgaactcggtgcgctc
gaccgcttgctcgccatgttgccgcgtgtggtgaaagtcggtggtgcagcaggaattatc
agcttccactcgctcgaagatcggcgcgtgaagcaagtgttccgcgaaccgaccgtgtgg
caacaagtgacgaaaaaaccggtcgaagccggtgacgaagaaacggcccgcaacccccgc
gcacgaagtgccaagttgcgagtcgctcggagagtcggggatcgatga
DBGET
integrated database retrieval system
