Geothrix sp. L227-G1: QOZ81_000975
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Entry
QOZ81_000975 CDS
T09988
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
get
Geothrix sp. L227-G1
Brite
KEGG Orthology (KO) [BR:
get00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
get03000
]
QOZ81_000975
Transcription factors [BR:
get03000
]
Prokaryotic type
Helix-turn-helix
Other families
QOZ81_000975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS
HTH_8
GAF
Mg_chelatase
PAS_9
AAA_5
PAS_8
PAS_4
AAA
AAA_2
AAA_16
HTH_50
HTH_30
IstB_IS21
DUF815
AAA_22
HTH_1
AAA_7
ATPase
MCM
Motif
Other DBs
NCBI-ProteinID:
WIL21705
LinkDB
All DBs
Position
1097565..1099568
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AA seq
667 aa
AA seq
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MAHKAGRTTESWATWDRFIRAGKIEPGALGPELEASWHRCKAAGVDPLAGRSTLVLGSAA
FAALAERKQDLIRVAKPFMENLYSLVAGSSFVVLLFDEQGYLLEAVGDQDRILASQDLNL
NKGALWAEGEVGTNGAGTPLVLGRPFQVSGAEHYCQKHHRWTCSGAPIFDPRGKTIGLLD
MTGPVDETHIHTLGLVMAAVQAIQHELKLGQKNQELTLLNNRLSSILFTVTDGVLVLDVD
GVLSQINPVAERLLGVSNPQAAGKRMTDLVQDLGPIRELLEWGQEFLDREMELKSSRGAI
QCIVSGKPILDEGGLLKGAVLFVNPINKIKRLINRFSGAQATFRFEDILGQGESLQRAVQ
QGQLASANESNVLLTGESGTGKEMFAHAIHNQSERRKGPFVAVNCGAIPRELIASELFGY
QDGAFTGAARGGRPGKFELASGGTLFLDEIGDMPLEQQIALLRVLQDRTITRLGGDRSFV
VDVRIICATHKDLREEIRKGTFRQDLYYRLNVSMIKLPPLREHPEDIPELLEAFMYKFAA
RKGVSNLRIDPRVIGILQGYAWPGNIREFQNVVERMIHSVQGTELSLNDIPDEILRVPDP
PLPMAASQSPGHTRSAGPASLREQLLAEERETIQASLRTWKGNMSKAAQELGMARNTLYR
KVQKLGI
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaaagcaggacgcaccacggaaagctgggcgacctgggaccgcttcatccgc
gccgggaagatcgaaccaggtgcgctggggcctgaactggaagcgtcctggcaccgctgc
aaggccgcgggtgtggatccactggcggggcggtccaccctggtgctggggtccgccgcg
ttcgccgccctggcggaacggaagcaggatctgatccgggtggccaagcccttcatggag
aacctgtacagcctcgtggccggctccagcttcgtggtgctgctgttcgatgagcagggg
tacctgctcgaggccgtgggggatcaggatcggatcctcgcctcccaggacctgaacctg
aacaagggagccctctgggccgaaggcgaggtggggaccaacggagccggcaccccgctg
gtcctgggccgtcccttccaggtttcaggggctgagcactactgccagaaacaccaccgg
tggacctgctccggggcgcccatcttcgacccacgcgggaaaaccatcggcctcctggac
atgaccgggccggtggatgagacccacatccacacgctcgggctcgtgatggccgccgtg
caggccatccagcacgaactgaagctggggcagaagaaccaggaactgaccctgctgaac
aaccgcctttccagcatcctcttcaccgtcaccgacggggtgctggtgctggatgtcgac
ggggtcctcagtcagatcaatcccgtggcggagcgtttgctgggggtctccaacccgcag
gcggccggcaagcgcatgacggacctggtccaggatctggggcccatccgtgagctgctg
gagtggggccaggaattcctggaccgggagatggaactgaaatccagccggggggccatc
caatgcatcgtcagcggcaagcccatcctggatgaaggcggtctgctcaagggcgccgtg
ctgttcgtgaatcccatcaacaagatcaagcggctcatcaaccgcttcagcggggcccag
gccaccttccgtttcgaggacatcctgggccagggggagtccctgcagcgggccgtccag
cagggccagctggcttccgccaacgaaagcaacgtgctgctgacgggggagagcggaacc
ggcaaggaaatgttcgcccacgccatccacaaccagtcggagcgccggaaagggcccttc
gtggccgtgaattgcggggccatcccccgggaactcatcgccagcgagctgttcggctat
caggacggcgccttcaccggcgccgcccggggcggacgtccggggaaattcgagctggcg
agcgggggcaccctcttccttgacgagatcggggacatgccgctggagcagcagatcgca
ttgctccgggtgctgcaggaccggaccatcacccgcctcggcggcgaccgctccttcgtc
gtggatgtgcggatcatttgtgcaacccacaaggacctgcgggaggagatccggaagggc
accttccgccaggacctctactaccggcttaatgtctccatgatcaagctgccgccgctg
agggagcatccggaggacattcccgaactgctggaggccttcatgtacaagttcgccgcg
cgcaagggcgtgtcgaacctgcgcatcgatcccagggtgatcggcatcctccagggctat
gcctggcccggcaacatccgggaattccagaatgtggtcgagcggatgatccattccgtc
cagggaacggagctctccttgaacgacattcccgacgaaatcctgcgggtcccggatccg
ccacttcccatggcggcatcccaatctcccggtcacaccaggtccgcaggtcctgccagc
ctccgggaacaactgctggcggaggagcgggaaacgatccaggccagcctgcgcacctgg
aaggggaatatgagcaaagccgcccaggagctggggatggccaggaacactctttaccgg
aaagttcagaaactgggcatttga
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