Geothrix sp. L227-G1: QOZ81_001368
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Entry
QOZ81_001368 CDS
T09988
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
get
Geothrix sp. L227-G1
Pathway
get03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
get00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QOZ81_001368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
get03000
]
QOZ81_001368
03400 DNA repair and recombination proteins [BR:
get03400
]
QOZ81_001368
Enzymes [BR:
get01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
QOZ81_001368
Transcription factors [BR:
get03000
]
Prokaryotic type
Helix-turn-helix
AraC family
QOZ81_001368
DNA repair and recombination proteins [BR:
get03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QOZ81_001368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WIL22080
LinkDB
All DBs
Position
1522292..1523707
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AA seq
471 aa
AA seq
DB search
MRWSDEHLYERILAKDASFNGRVLTGVLTTGIYCLPSCPARKPLAINVRFFPDEPAAQAA
GLRPCKRCRPDAFYRGEDADLARLESALAQAVADPAAFPEVEALAEAAGVGVTKLKDLFR
DHVHLQPAAFLQRIRIQSACVRLAAGQGELTDLAMDSGYESASGFHEAFRRQTGLSPGAF
RTMLGSDHFTLSMPAGLRVQDVLAFHGRDGQSVSERVDGKRLHKAFLCEGKPSVLSLAFQ
EEAVDVSLQGATGPAAMATAHGAALRLLGWQGDPSAFETAHPRLARGREGLRVLLTLDPF
EALVWAILGQQVNLAFAYALRRDLIRLAGDPVEGGLFAHPDAARIAGLQVEELLALRFSR
RKAEYLLHAAAEVASGRLLLEGRTTATGLARDLLALRGCGPWTAQYALMRGFGFRDCVPV
GDAGLTLALQRWFKLDTRPDAAETLRLMAPFAPHRSLATFHLWSSLKGTPA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggtcggatgagcacctctacgaacggatcctggcgaaggacgcctccttcaac
ggcagggtcctgacgggcgtcctcaccaccgggatctactgcctgccctcctgccccgcc
cggaaacccctggccatcaacgtgcggttctttccggacgaaccggccgcccaggctgcg
gggctccgtccctgcaagcgctgccgccccgatgccttctaccggggcgaggatgctgac
ctggcccgactggaatccgccctggcccaggccgtggcggacccggccgcctttcccgag
gtcgaggccctggccgaggcggccggcgtgggcgtcacgaagctgaaggacctgttccgc
gatcatgtccacctccagcccgcggcattcctccagcgcatccgaatccagtcggcctgc
gtccggctcgcggcggggcagggcgagctgacggacctggccatggactccggctacgaa
agcgcgtcggggttccacgaggccttccgccggcagacgggactgagccccggcgccttc
cgcaccatgctgggttcggaccacttcaccttgtccatgcccgcaggcctgcgggtgcag
gacgtgctggccttccacggtcgcgatggccagagcgtgtccgagcgtgtggacgggaag
cgactgcacaaggccttcctctgcgaaggcaagccttccgtgctcagcctggcctttcag
gaagaggccgtggacgtgtccctgcagggggcgacgggtcccgccgccatggcgacggcc
catggtgcggccctccgcctgctgggctggcagggcgatccctccgccttcgaaacggcc
catccccgactggcgcggggccgtgagggactgcgcgtgttgctcacgctggatcccttc
gaggccctggtgtgggcgatcctggggcagcaggtgaacctggccttcgcctacgccctg
cgccgtgacctgatccggctggcgggcgacccagtagaaggcggcctcttcgcccatcct
gatgcggcccggatcgccgggttgcaggtcgaggagctcctggccctgcgcttctcccgc
cgcaaggccgagtacctgctgcatgccgccgccgaggtggcctcgggccggctgctcctg
gaagggcggaccacggccacgggcctggcccgagacctgctcgccctgcggggctgcggg
ccctggacggcgcagtacgcgctgatgcggggcttcggtttccgcgattgcgtgcccgtg
ggggatgcgggcctcactctggccctgcagcgctggttcaagctcgacacgcgcccggat
gccgcggagacgctgcgcctgatggcgcccttcgcgccccaccgcagcctcgccaccttc
cacctctggtccagcttgaaaggaactcccgcatga
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