KEGG   Geothrix sp. L227-G1: QOZ81_001702
Entry
QOZ81_001702      CDS       T09988                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
get  Geothrix sp. L227-G1
Brite
KEGG Orthology (KO) [BR:get00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:get03032]
    QOZ81_001702
   03036 Chromosome and associated proteins [BR:get03036]
    QOZ81_001702
   03400 DNA repair and recombination proteins [BR:get03400]
    QOZ81_001702
DNA replication proteins [BR:get03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    QOZ81_001702
Chromosome and associated proteins [BR:get03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    QOZ81_001702
DNA repair and recombination proteins [BR:get03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      QOZ81_001702
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: WIL19201
LinkDB
Position
1874243..1874554
AA seq 103 aa
MAENLTKAELVEAVAKAADITKSAAAAAIGCFLGTISGHVGKGGKVTLVGFGTFSQKVRK
ARTGRNPQTGAAIKIGASKSMGFKASKAGAAKKAAPKKAAKKK
NT seq 312 nt   +upstreamnt  +downstreamnt
atggccgagaacctcaccaaggctgaactcgtcgaagccgtcgccaaggctgccgacatc
accaagtccgccgccgccgctgcgatcggctgcttcctcggaaccatctccggccacgtc
ggcaagggcgggaaggtgaccctggtcggcttcggcaccttctcccagaaggtccgcaag
gcccgcaccggccgcaacccccagactggcgccgcgatcaagatcggcgcttccaagtcc
atgggcttcaaggcctccaaggccggcgccgcgaagaaggccgcccccaagaaggctgcc
aagaagaagtag

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