Geothrix sp. L227-G1: QOZ81_002302
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Entry
QOZ81_002302 CDS
T09988
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
get
Geothrix sp. L227-G1
Pathway
get03420
Nucleotide excision repair
get03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
get00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QOZ81_002302
03430 Mismatch repair
QOZ81_002302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
get03400
]
QOZ81_002302
Enzymes [BR:
get01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QOZ81_002302
DNA repair and recombination proteins [BR:
get03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QOZ81_002302
MMR (mismatch excision repair)
Other MMR factors
QOZ81_002302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_22
AAA_11
Terminase_6N
SRP54
DEAD
G-alpha
Motif
Other DBs
NCBI-ProteinID:
WIL19770
LinkDB
All DBs
Position
complement(2559295..2561592)
Genome browser
AA seq
765 aa
AA seq
DB search
MPGPASEPIDHPLLRNLNAPQREAVRHAHGPLLILAGAGSGKTTVITRRIAWLVEEEGVH
PGSILAMTFTNKAAEEMRERVQRLVSVPAAQLWVSTFHSFCTRILRREGERTPVGRDFVI
FDPADQKSLVKQVLAELKLPEKQFHPKKVLEIISDFKNRCLLPEEAREEALDPWTRKVLD
AYDLYQKGLKNHRACDFDDLLLWTERLFRDPVMQSVYGERFKFILVDEYQDTNRAQYLLV
QHLARRHHNLCVVGDEDQSIYGWRGADIRNILDFQQDFPEAVRIELLQNYRSTKKILDAA
SEVIANNAQRVEGKGALVTDLGEGESIQFKLSDEGRLESEWVVQRIQELRYLDHEAKVAV
LYRANWQSRQMEEALRAQNLAYRLVGGVKFYERQEVKDLISYLRLISNPFDLVSFRRCVN
APSRGVGPTTLGKIEGAIPEGGTPLEGLAVLLRAGELKGRAQRELGKFLDLFHRAGTERE
AQGLAGLVKWVLQESGYLQSLEDEATLEAEGRIRNLEEFLSAAAESESLGLRLSEFLDRI
TLAADTDQIEEAAQLSLMTIHCAKGLEFPYVFVIGMEEDVFPNRNARETPEGLEEERRLF
YVAITRAQRRLTLSAARRRRIMGTEMLSMPSRFLRELPAAALTAPIRWGTELYQAGEGVR
PGSSFSRGAGGASVATELQRIRSFFDRVKEAPVPPGDSDGGMRPEPAEKEDPSAFPAGTR
VRSARFGAGTILAASGRGDGLTYTVRFDQGGDKRIMARFGGLERA
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccccgcctccgaaccgatcgaccatcccctcctgcgaaatctgaacgccccc
caacgggaggcggtgcgccatgcccatggccccctcctgatcctcgccggggcgggctct
ggcaagaccacggtgatcacccggcgcatcgcctggctcgtcgaggaggagggcgtgcac
cccggctcgatcctcgccatgaccttcacgaacaaggccgccgaggagatgcgggagcgg
gtgcagcggctggtgtccgtgcccgccgcccagttgtgggtgagcaccttccacagcttc
tgcacgcgcatcctgcgccgcgagggggagcggacgcccgtgggccgcgacttcgtcatc
ttcgaccccgccgaccagaagagcctcgtcaagcaggtgctggccgagctgaagctgccg
gagaagcagttccaccccaagaaggtcctcgagatcatcagcgacttcaagaaccgctgc
ctgctgccggaagaggcccgggaggaggccctggatccgtggacccgcaaggtgctggat
gcctacgacctctaccagaagggcctgaagaaccaccgggcctgcgacttcgacgacctg
ctgctctggaccgagcgcctcttccgcgatccggtgatgcagtcggtctatggcgagcgc
ttcaagttcatcctggtggacgagtaccaggacaccaaccgcgcccagtacctgctggtg
cagcacctggcgcgacggcaccacaacctgtgcgtggtcggtgatgaggaccagtcgatc
tatggctggcgtggcgcagacatccgcaacatcctggacttccagcaggacttccccgag
gccgtgcgcatcgagctgctgcagaactaccgctccacgaagaagatcctggacgcggcc
tccgaggtgattgccaacaacgcccagcgcgtggagggcaagggcgcgctcgtcacggac
ctgggcgagggcgagtccatccagttcaagctctcggacgaagggcggctggagtccgag
tgggtggtgcagcgcatccaggagctgcgctacctggaccacgaggccaaggtcgccgtg
ctctaccgcgccaactggcagtcccggcagatggaagaggcgctgcgcgcccagaacctg
gcctaccgcctggtgggcggcgtgaagttctacgagcgccaggaggtgaaggacctcatc
tcgtacctgcggctcatctcgaaccccttcgacctggtgagcttccgccggtgcgtgaac
gcgcccagccggggcgtgggtcccaccaccctcggcaagatcgagggcgccatccccgag
ggcgggacgcccctcgaaggattggccgtgctgctgcgcgctggcgagctcaagggccgc
gcccagcgggagctgggcaagttcctggacctgttccaccgcgccggaacggagcgcgag
gcgcaggggctcgccggcctggtgaagtgggtgctccaggagagcggctacctccagagc
ctcgaggatgaggccacgctggaggccgaggggcgcatccgcaacctggaggagttcctc
agcgccgccgccgaatccgagtcgctgggcctccgcctgtcggagttcctggaccggatc
accctcgccgcggataccgaccagatcgaggaggccgcccagctcagcctcatgaccatc
cactgcgccaagggcctggagttcccctatgtcttcgtgatcggcatggaggaggacgtc
ttccccaaccgcaacgcccgggagacaccggagggcctggaggaggagcgccgcctgttc
tacgtggccatcacccgcgcccagcggcgcctcacgctcagtgccgcccgccgccgccgc
atcatgggcacggagatgctgtccatgcccagccgcttcctccgcgagctcccggctgcg
gccctgacggcgcccatccgctggggcaccgagctctaccaggctggcgagggcgtgcgg
cccggcagctccttcagccggggcgccggtggggcctccgtggccaccgagctgcagcgg
atccgcagcttcttcgatcgggtgaaggaggcgccggttcctcccggcgactccgacggc
ggcatgcgccccgagcctgccgagaaggaagaccccagcgccttcccggccggtacccgc
gtgaggagcgcccggtttggcgccggcaccatcctcgccgcatcggggcgtggcgatggc
ctgacctataccgtgcgcttcgaccaggggggtgataagcgcatcatggcgcggttcggg
gggctggagcgggcttga
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