Geothrix sp. L227-G1: QOZ81_002392
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Entry
QOZ81_002392 CDS
T09988
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
get
Geothrix sp. L227-G1
Pathway
get02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
get00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QOZ81_002392
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
get02022
]
QOZ81_002392
02035 Bacterial motility proteins [BR:
get02035
]
QOZ81_002392
Two-component system [BR:
get02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
QOZ81_002392
Bacterial motility proteins [BR:
get02035
]
Pilus system
Twitching motility proteins
QOZ81_002392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA
bpMoxR
AAA_16
HTH_8
VpsR
Mg_chelatase
AAA_2
FleQ
MCM
AAA_7
AAA_22
Myosin_head
AAA_3
Motif
Other DBs
NCBI-ProteinID:
WIL19859
LinkDB
All DBs
Position
complement(2669582..2671036)
Genome browser
AA seq
484 aa
AA seq
DB search
MSLASTQRILLVEDEPGLREVLTLALEGAGFKCEAAAGIEEGQRALRETTFDGVLSDLKL
KDGSGIELLTWMKEQGLETPVVIMTAYATTETTVQALNQGAVDFITKPFKHEELIASLKG
LLAAAEPQAAPPSDLGELVGVGPIMRKINALIGKVSRADTTVLLTGESGTGKEVVARLIH
RYSDRAKGPFVAVNCGALPEALLESELFGFEKGAFTGAGAMKRGLFEEAGGGILFLDEIG
EMPSSLQVKLLRVLQERRFRRLGATEERAVDVRVIAATNRDLRTRAETGAFREDLYYRLN
ILQIELPPLRERPEDLPVLAEHFIRRSCQKLGKAPMQLHPETMSQLLCHRFPGNVRELEN
LMERCVALNPGGPITKDLLPDGLGLAGPAQGLSRLAPLVIPPEGFDLEAWIQALKGHFLR
RALDEVGGVKTKAGKRLGMSFRAYRYWLAELGGLEALPMEFPWPADFPAPVVDEGGGTEG
PKEA
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtccctagcctcgacccaacggatcctgctggtggaggacgaacccggcctccgggag
gtgctgaccctggcgctggagggggccggcttcaagtgcgaggccgccgctggcatcgag
gaggggcagcgggccctccgggagaccaccttcgacggcgtgctctccgacctgaagctc
aaggacgggtcgggcatcgaactgctgacctggatgaaggagcaggggctggagacgccg
gtggtcatcatgaccgcctacgccaccaccgaaaccaccgtgcaggccctgaaccagggg
gccgtggatttcatcacgaagcccttcaagcacgaagagctgatcgcctccctcaagggc
ctgctcgccgccgccgagccccaggccgccccgccctcggacctgggcgagctggtgggg
gtggggcccatcatgcggaagatcaacgccctcatcggcaaggtctccagggccgacacc
acggtgctcctgacgggcgagagcggcacgggcaaggaggtggtggcccggctcattcac
cggtactccgatcgcgcgaagggacccttcgtggccgtgaactgcggggccctgcccgag
gcgctgctggagagcgagctgttcggcttcgagaagggcgccttcaccggtgccggggcc
atgaagcggggcctcttcgaggaggcgggcggcggcatcctcttcctcgacgagatcggg
gagatgccctcctccctccaggtgaagctgctgcgggtgctccaggagcgccgcttccgc
cggctgggggccacggaagagcgggccgtggacgtgcgggtcatcgccgccaccaaccgg
gacctcaggacgcgagccgaaaccggcgccttccgggaggacctgtactaccgcttgaac
atcctccagatcgagctgcccccgctgcgggagcggcccgaggacctgccggtgctggcg
gagcacttcatccggcgctcctgccagaagctgggcaaggcgcccatgcagctgcacccg
gagaccatgtcgcagctcctctgccaccggttccccggcaatgtccgcgagctcgagaac
ctcatggagcgctgcgtggcgctcaaccccggcggccccatcaccaaggacctgctgccg
gacggactcggcctggccgggcccgcccagggcctgagccgcctcgcgcccctggtcatc
ccccccgagggcttcgacctcgaagcctggatccaggccctgaaggggcacttcctccgg
cgggccctggacgaggtcgggggcgtgaagaccaaggccggcaaacgcctcggcatgagc
ttccgggcctaccggtactggctggccgaacttggcggcctggaggcccttcccatggaa
ttcccctggcccgccgacttccccgctccggtggtggacgaagggggcggaaccgaaggc
cccaaggaggcatga
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