Geothrix sp. L227-G1: QOZ81_002586
Help
Entry
QOZ81_002586 CDS
T09988
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
get
Geothrix sp. L227-G1
Brite
KEGG Orthology (KO) [BR:
get00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
get03032
]
QOZ81_002586 (topA)
03400 DNA repair and recombination proteins [BR:
get03400
]
QOZ81_002586 (topA)
Enzymes [BR:
get01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QOZ81_002586 (topA)
DNA replication proteins [BR:
get03032
]
Prokaryotic type
DNA Topoisomerases
QOZ81_002586 (topA)
DNA repair and recombination proteins [BR:
get03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QOZ81_002586 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_19
Motif
Other DBs
NCBI-ProteinID:
WIL20043
LinkDB
All DBs
Position
2879845..2882319
Genome browser
AA seq
824 aa
AA seq
DB search
MTKLVIVESPSKAKTITKYLGKGYKVMASVGHIRDLPKKLGVDIENGFQEEYEISPAKEK
VVKELKAAAKTATELVLATDPDREGEAISWHLLEAIKPPKTLPVSRVLFNEITPAGIQKA
MAAPTTINKKLVDAQRARRVLDRLVGYKVSQVLWDKVRRGLSAGRVQSVAVRIIVDREKE
ILAFNPVEYWVLKGRFAAKLPPSFWMRLVKLGGQPLQLGNKETKRRVGDAAQAKDLKTKL
EKADYKVTGLETKEKKRNPAAPFTTAKLQQESAQKLKMSVSRTMQNAQRLYEGVDFGEGP
VGLITYMRTDSPRMAPEAVEATREFIASKYGKEFLPAKARVYTGKAGAQDAHEAIRPTDI
TRTPESLRGHLEPDQFRLYALIWRRTMASQMEAARFDETVVQTEAEVGKDTATFEAKGEI
ERFAGWLAVYRADKTEVEAEAIADATKGADEEDEDDAQLPALKLGEALKLEQLDADQQFT
KPPARFNEATLVKELEEDGIGRPSTYASIISTIQDRDYVKKHEGRFKPTDLGMTVTELLL
QGFHDLMDPKYTSGMEGNLDRIEEGKLTFKKAMTDFYGPFEQSLAAAGKDMQNLKAGVPT
GEKCPKCGDRKKNPGTLLKRIGRNGLFVGCTNYSAELEKDKCDYTADLEKMEEPEDAPEC
PLCGTTPMNLRKGQWGPFWACPNYPKCKGIVKADPKGIPVPPDEPTGEKCPNCGKGFVKR
HGRYGEFVCCVDYPTCKTVKKEILAVPCPKCGGGLSPRKTRFGKVFYGCTNYPKCDFTAW
DKPVPVTCPACKNPIMGEKTKKPRGKDPIQVLVCPNCKHEEPMG
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagctcgtgatcgtcgaaagcccctccaaggcgaagaccatcaccaagtacctc
ggcaaggggtacaaggtcatggcttccgtggggcacatccgggacctgccgaagaagctg
ggcgtggacatcgagaacgggttccaggaggaatacgagatcagcccggccaaggagaag
gtggtcaaggagctgaaggccgccgccaagaccgccaccgagctggtgctcgccaccgac
cccgaccgcgagggggaggccatcagctggcacctgctggaggccatcaagccgcccaag
accctgcccgtgagccgcgtcctcttcaacgagatcaccccggcgggcatccagaaggcc
atggccgcccccaccaccattaataagaagctggtggacgcccagcgggcccgccgcgtg
ctggaccgcctggtgggctacaaggtgagccaggtgctctgggacaaggtgcgccggggc
ctcagcgccgggcgcgtgcagagcgtggccgtgcgcatcatcgtggaccgcgagaaggag
atcctggccttcaaccccgtcgagtactgggtgctgaagggccgcttcgccgccaagctg
ccgccctccttctggatgcgcctggtgaagctggggggccagccgctacagctcggcaac
aaggagaccaagcgccgcgtgggcgatgccgcccaggccaaggacctgaagaccaagctc
gaaaaggccgactacaaggtcacgggcctggagaccaaggagaagaagcgcaaccccgcc
gcccccttcaccaccgccaagctgcagcaggaatcggcccagaagctcaagatgagcgtg
agccgcaccatgcagaacgcccagcggctctacgagggcgtggacttcggcgaaggcccc
gtgggcctcatcacctacatgcgcaccgactcgccccgcatggcccccgaggccgtggag
gccacccgcgagttcatcgcgtcgaagtacggcaaggagttcctgcccgccaaggcccgc
gtgtacacaggcaaggccggggcgcaggacgcgcacgaggccatccgccccacggacatc
acccgcacgccggaatccctgcgcgggcacctggagcccgaccagttccgcctctacgcg
ctgatctggcggcggacgatggcctcgcagatggaggccgcgcgcttcgacgagaccgtg
gtgcagaccgaggccgaagtgggcaaggacacggccaccttcgaggccaagggcgagatc
gagcgcttcgcgggctggctggcggtgtaccgcgccgacaagaccgaggtggaagccgag
gccatcgccgatgccaccaagggcgccgacgaggaggacgaggacgacgcgcagctgccg
gccctgaagctgggcgaggcgctgaagctcgagcagctcgacgcggaccagcagttcacc
aagccccccgcccgcttcaacgaggccacgctggtgaaggagctggaggaggacggcatc
ggccggccctccacctacgccagcatcatcagcaccatccaggaccgcgactacgtcaag
aagcacgagggccgcttcaagcccacggatctcggcatgacggtcaccgagctgctgctg
cagggcttccacgacctcatggatcccaagtacacctcgggcatggagggcaacctcgac
cgcatcgaggagggcaagctcaccttcaagaaggccatgacggacttctacgggcccttc
gagcagagcctggccgccgccggcaaggacatgcagaacctcaaggccggcgtgcccacg
ggggagaagtgccccaagtgcggcgaccggaagaagaaccccggcacgctgctcaagcgc
atcggccgcaacgggctcttcgtgggctgcaccaactacagcgccgagctggaaaaggac
aagtgcgactacacggcggacctcgaaaagatggaggagcccgaggacgcgccggagtgc
ccgctctgcggcaccacgcccatgaacctgcgcaagggccagtggggccccttctgggcc
tgccccaactaccccaagtgcaagggcatcgtgaaggccgatcccaagggcatccccgtg
ccgccggacgagcccacgggcgagaagtgccccaactgcggcaagggcttcgtgaagcgg
cacggccgctacggcgagttcgtctgctgcgtggactaccccacctgcaagaccgtgaag
aaggagatcctggccgtgccctgccccaagtgcggcggcggcctcagcccccgcaagacc
cgcttcggcaaggtcttctacggctgcaccaactaccccaagtgcgacttcaccgcctgg
gacaagcccgtccccgtcacctgccccgcctgcaagaaccccatcatgggcgaaaagacc
aagaagccccgggggaaggatcccatccaggtgctcgtgtgccccaactgcaagcatgaa
gagccgatggggtga
DBGET
integrated database retrieval system
