Gleimia europaea: CJ185_004110
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Entry
CJ185_004110 CDS
T09095
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
geu
Gleimia europaea
Brite
KEGG Orthology (KO) [BR:
geu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
geu03016
]
CJ185_004110
Enzymes [BR:
geu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CJ185_004110
Transfer RNA biogenesis [BR:
geu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CJ185_004110
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WIK63499
LinkDB
All DBs
Position
complement(916659..917891)
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AA seq
410 aa
AA seq
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MPDRPQPIENMTDSDPTLIVHPHEGTPDPTDTPEDLNRAIKKLASSTMPVAIDVERASGF
RYSDRAYLIQIRREDTGTFLIDADALPHLHSLGEALQNAVWILHAADQDLPSLRGANLHA
PELFDTEVAAQLLGFERIGLAAVLEQTLGVTLDKEHQASDWSNRPLPRSWLRYAALDVEF
LTQLYRVLSRELYDAGRWDWAEQEFAHILSREPKPADPNKWRSIPGAGKIRTRRQLAILQ
QLWRAREAIAREQDIAPTRLISNRTLVSLAFKPPRNKRALLSIQEMRRPRTRSHTDEWIR
AIRHAKCMSETDLPPLRKPVAPGTLPKVSGWRSAHPDELARLKTIRRAIEPLAKELGIDP
AVLLEPRVQKRLAWDGPVLRPAEMREYLRRRGAREWQIERVAGALVKATN
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccgtccgcaacctatcgagaacatgaccgattctgaccccaccctgatagtg
cacccgcacgaaggcacgccagatccaaccgatacgccagaagaccttaaccgcgcgatc
aagaaactcgcaagttccactatgcccgtggcaattgacgtggagagagcctccggcttc
cgctactcagaccgcgcctacttaatccagattcgacgtgaggatacgggcaccttcctc
atcgatgcagacgcgctcccccacttgcactctttgggcgaagcactgcaaaacgctgtg
tggatcctgcacgcggcagaccaggatttgccaagcctgcgcggcgcaaacctgcacgct
ccagagctttttgataccgaggtggcagcgcaactactggggtttgagcgtattgggctc
gctgctgtgttggaacaaaccctgggcgtaacactcgataaggagcatcaagcttctgat
tggtctaaccgtccactgccccgaagctggctgcgttacgccgcgctggatgtggaattt
ttaactcagctatacagggtgctcagccgcgaactgtatgatgccggccgctgggattgg
gcagaacaggaattcgcgcacattttgagtagagagcctaaaccggcggacccgaacaag
tggcgttcgattcccggcgcaggcaaaatccgcacgcgccgccagttggcgattttacag
cagctttggagagcacgcgaggccattgcgagggagcaagatattgccccaactcgcttg
atcagcaaccgcacgctcgtgtctttagcattcaaacctccgcgaaataagcgggctctg
ctaagcattcaagaaatgcgccgcccgcgcacccgcagccacaccgatgagtggatccgc
gcaatcagacacgcaaaatgcatgtccgaaaccgatttaccaccattacgtaagcccgtt
gcgccgggaacgctaccgaaagtgtctggatggcgatctgcacaccccgatgagcttgca
cgccttaaaacgatccgtcgggccattgagccgctcgctaaagagctaggcatagatccc
gctgttttgttagagcctcgggtacaaaagcgtttagcctgggacggcccggtccttcgc
ccggccgaaatgcgagagtacctacgccgccgcggcgcacgcgagtggcagattgaacgc
gttgcaggcgcgctggtgaaagctaccaactag
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