Gleimia europaea: CJ185_006975
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Entry
CJ185_006975 CDS
T09095
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
geu
Gleimia europaea
Pathway
geu03420
Nucleotide excision repair
geu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
geu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ185_006975
03430 Mismatch repair
CJ185_006975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
geu03400
]
CJ185_006975
Enzymes [BR:
geu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ185_006975
DNA repair and recombination proteins [BR:
geu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ185_006975
MMR (mismatch excision repair)
Other MMR factors
CJ185_006975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
DUF2800
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WIK62258
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All DBs
Position
complement(1549961..1553578)
Genome browser
AA seq
1205 aa
AA seq
DB search
MTLNAMEFVETLNAQLEPGQKKIMLSPDQAKVVETDSVPTLVVAGAGSGKTEVMSLRALY
LMYRDGLEPDSILGLTFTRKATANFTERILRQLDLMRKAGLLGEADTIGLEPTVATYNSF
AKNLVSEYGLQIGVSPSVIQLSEARAWQVVERLLQEYTGPLPQGAKASTMRDAILSLSQS
LTEHQVVPARAAQDFERVAAAIKSAGPGTGATGRQRTALPASAKSFVTRMEDKALLMPLV
QRYWDYKREHDLIDFTDQLALARQIIDANPTIGAELRDQYRAVLLDEFQDTSVGQLQLFS
SLFRDTAATAVGDPNQAIYGWRGASAASLSMFLPYFDTQGRGGVLELRDAWRNWPAILEA
ANVVSNADKVETQAREEAFAHMDLASQIEMQSLRANPKHPGRGVVKYMFPSTRDEEFELV
ARLIKRWQENVPAGQKQPSIAILSRKRKFFAPLYAQLQKLGVNARIVGVGGLLTEPAVTD
IVAVMRSLAVPDNGAAVMRLVANLDLSSADIKILWDWAREQGKQRISDAGDPETIVSDVD
RAKANTDKPEAGADLRVEFLLDAVLTPPTVGWKKRGRQGFSPEAYSRVSLLARRLDLVRE
HMDAGVTTLISKVVKIFDLDLDIASDPFDNQGEIAIDAFIDFAANYEAETPYASVKNFLE
WIDTTLETEERLEAPVSEPDEGVVLLLTIHQAKGLEWDKVVVVGLTESDFPGVVDARNAA
LKQTVDLNGPLPAIQPSSGWTSELGEIPYSLRLDSTHEGRVILPTLPEMTGLDVVGVEET
FDEYRLQLSLHELAEARRLAYVAWTRASDELVLSGSWYAGQTQLVPSRYLMQMVQGKSEA
SEPLAIPVTVEDLVAEAGEEIPQPVVLKLEDATKPEECLTDQAVFPAMPSKSRQLITGAA
QAVNRAMEMYYQESDENTDFDALIDDLLKTVESGAGGNNGEIATLVHSARDAITRQNSPR
TPAPVIEIDRLNATQAFGLLDDPYRYAMQVRRPIPHEPSKAAQIGTAFHNWAEQWLAKAG
QLDDALEPTTNKPLTDIDSVADSGDSGDMQSLTGAEKKLFEQLTKRAREVVGNNPEGVHA
VEADFAYTKSGVTIRGRYDVVLNRDGKWVVLDWKTGAPPKLGAKNPYLRQYATQLEIYRR
ALAKQKGVDQSQIDAVLVFLGGPDTQPSERILRLEDLEKLLGDYNFEQQWDQLVNSFSPH
PHDSK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
gtgacactcaacgcaatggagtttgtagaaactcttaatgcccagcttgaaccgggacag
aagaagatcatgctttcgccggaccaggccaaagtagttgaaactgacagcgttcccact
ctcgtggttgccggcgccgggtctggaaaaaccgaagtgatgtcgctgcgtgccctctac
ctcatgtatcgtgacggccttgagcctgattcaattcttggcctcactttcacgcgtaaa
gcaaccgcgaacttcaccgaacgtatcctgcggcagcttgatttgatgcgaaaagcggga
ctacttggggaagcagacacgatcggcttggaaccaaccgttgctacttacaactcgttt
gcaaagaatctagttagcgagtacggccttcaaatcggggtaagcccgtccgtaatccaa
ctcagcgaagctcgtgcgtggcaggtagttgagcgtcttttgcaggaatacaccgggccg
ctaccacagggagcgaaggcctcgaccatgcgagatgccatactgtctctttcgcaaagc
ctgaccgagcatcaagttgttcctgcccgggccgcacaagattttgaacgtgttgcggca
gccattaaatctgcgggcccggggacgggcgccactggaagacaacgcacggcacttcca
gcctcggcaaagagttttgtgacgcgcatggaagacaaagcgctattgatgcctctggta
cagcgatattgggattacaagcgcgaacacgatctgattgatttcacggatcagttggcg
ttggctcgccaaattatcgacgcgaatccgaccatcggcgctgaactgcgtgaccaatac
cgcgctgttctattggatgaattccaggacacttcggttggtcagctccagctgttctcc
agcctgtttagagatactgccgccactgcggtcggggacccaaaccaggcgatttacggt
tggcgtggtgcgtcagcggcttcgctttcaatgttcttgccctattttgacacgcagggc
cgaggcggggtgcttgagcttcgcgatgcgtggcgtaactggcctgccattttggaagcc
gcaaacgtggtttctaatgccgacaaggttgaaacccaagcacgagaagaagcctttgca
cacatggatttggcaagccaaatcgaaatgcagagcctgcgtgccaatccaaaacacccg
gggcgcggcgtagtgaagtacatgttcccatccacgcgcgacgaggagttcgaactggtt
gcgcgtcttatcaagcgctggcaagaaaacgtgccggccggtcagaaacagccatcgatt
gcgatcttgtcgcgcaaacgaaagttctttgcacccctttatgctcagcttcaaaagctg
ggcgtgaatgcgcggattgtgggtgttgggggccttctaacagagccggcggtaactgac
attgttgctgtcatgcgctccctcgcagtgcctgacaatggtgcggctgtgatgcgtctg
gttgcaaaccttgacctgtcttccgcagatataaagatcctgtgggactgggctagagaa
caaggcaaacagcgaatatctgatgctggagatcccgaaaccattgttagtgacgtggat
agagcgaaggccaacactgacaaaccggaagcgggtgcggatctgcgcgttgagtttctg
ctcgacgcggtcctgacacctccaacggttggatggaaaaagcgtggtaggcaagggttc
agtcctgaagcgtatagtcgtgtgagcctcctagctagacgcctcgaccttgtccgcgaa
cacatggatgccggcgtaaccacactcatctcgaaggtggtcaagatttttgaccttgac
ctggacattgcgtctgatccgtttgacaaccagggtgaaatcgcaatagacgcattcatt
gatttcgctgccaattacgaagccgaaactccgtatgcttcggtgaagaatttcctggaa
tggatagacaccaccctcgagacagaagagaggttggaagcgcctgttagcgaacccgat
gaaggggtagtgctactgctaaccattcaccaagcaaaaggtttggaatgggacaaggtt
gtagtggttggcctaacagaatcagatttccccggcgtggtcgatgcccgaaatgctgcg
cttaaacaaaccgttgatttaaacggaccgttgcctgctatccaaccatccagtggctgg
acgtcggagctgggagagatcccgtacagtctgcgcctcgatagtactcatgagggcagg
gtcattttgcctacccttcccgagatgacgggcctagatgttgttggagtagaggaaacc
ttcgatgaatatcgtctgcaactaagcctgcatgaactggctgaggctcgccgcctcgcg
tatgtcgcttggacgcgagcatcagatgagcttgtgctgtcgggctcctggtatgcgggt
caaacccagttggtgccttcgcgttacctcatgcaaatggtgcagggtaaatccgaagct
tcagagccgctggccattccggttactgtagaagacctcgtagctgaggctggagaagag
atcccgcagccggtggtgttgaagctagaagatgccactaagccagaagaatgcctcacg
gatcaggctgtcttcccggccatgccttctaaatcgcggcagctcattaccggcgcggca
caagccgtgaatcgggctatggaaatgtactatcaagagtcagatgagaacactgatttt
gatgcgctaattgacgatctcctaaaaactgtcgaaagcggagcgggtggcaataacggt
gaaattgcaacacttgttcactcagcgcgagacgcaataacacgacaaaatagccctcgc
actccggctcctgtgatcgaaatagaccggctgaatgccacacaagcgtttggactactg
gacgatccttaccgctatgcgatgcaggttcgccggcccatcccgcatgagccaagcaag
gccgcccaaattggaacggcattccacaactgggcggagcagtggctggccaaagcaggt
caactcgacgatgctcttgagcccacaactaacaagccgctaacagatatcgattcggta
gcggacagtggtgacagtggcgacatgcagagtctgactggagctgagaaaaagttgttc
gagcaactcactaagcgcgccagggaagtggtggggaacaaccccgaaggcgttcacgcc
gttgaggcggattttgcctacaccaagagcggggtaactatccgtggtcgttacgacgtg
gtccttaaccgcgatggcaaatgggtggtcctggactggaagaccggtgctccacccaaa
ctaggagctaaaaacccgtatctgcgccagtacgccacgcagcttgagatctatcggcga
gctctggccaaacaaaagggcgtggaccagtcgcaaatagatgctgttttggtcttcctc
ggaggcccagacacgcagccgagcgagcggatactccgtctagaggacctggaaaaactc
ctcggagattacaacttcgagcagcagtgggatcaacttgtaaacagttttagtcctcat
cctcacgattcaaaatag
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