Gleimia europaea: CJ185_007605
Help
Entry
CJ185_007605 CDS
T09095
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
geu
Gleimia europaea
Pathway
geu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
geu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CJ185_007605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
geu03021
]
CJ185_007605
03400 DNA repair and recombination proteins [BR:
geu03400
]
CJ185_007605
Enzymes [BR:
geu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CJ185_007605
Transcription machinery [BR:
geu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CJ185_007605
DNA repair and recombination proteins [BR:
geu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CJ185_007605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WIK62377
LinkDB
All DBs
Position
complement(1679705..1683622)
Genome browser
AA seq
1305 aa
AA seq
DB search
MIDANAFDKLHIGLATLDDIHEWSHGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIVCERCGVEVARADVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITEVDEEARREDLPTLRNELEVERKNIEARREADINARAEALEAR
LAEMEEKGNKQETRDRERRAGERDMNAIRRGYEQRLARLEEVWDKFMNLQVGDLEGDELI
YRDMQARYGIYFKGAMGAAAIQKRLQSFDLEAEAEALREIIATGTGQRKTRALKRLKVVN
AFLTTDNVPEAMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLEL
NAPEIIVNNEKRMLQESVDALFDNGRRGRPVSGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLIEKKYAQNIKAAQRKVDRSR
PEVWDVLDEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEAQAEARVLMLSSNNILKPSDGRPVTMPSHDMIIGLYHLTLNPDSSIPVPR
NEETGEPILPHFSSVAEAIMAFDRGDLHLNARAIIRFTDIVPPKNWVAPEGWSEGDPIEL
ETSLGRALFNDLLPVEYPYVEAVVNKKVLGKVVNDLAELYPKVLVAESLDALKAAGFYWS
TWSGLTIAFDDIMTPPNKGEILAQHEAAAARIQRDYEIGKITEDERYNALVEIWTTATRE
VADAMEEAFPERNNLFQMVDSGARGNWDQVRQLAGMRGLVSDPKQKLIERPIKANYREGL
TVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVVVHEEDCGTRRGINMDIAEL
DEEGKAHRLDTVETTAYARTLAADAKDAEGNVVAEAGSDVGDVLIDKLVDAGITTIKVRS
VLYCESATGTCAACYGRSLASGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAA
DITQGLPRVQELFEARTPKGEATMAEAAGKVHIDDTDPTNRKIVITRDDGEADLVVEVSR
RQELLVEEGEHIAVGTKLTTGRLDPKKMLRIRNKSETQRQLVDEVQEVYRSQGVDIHSKH
IEVIVRQMLRRVTVLDDPGDTELLPGQLVDEVDFKRINRATVAQGGRPAAGRPELMGITK
ASLATDSWLAAASFQETTKILTEAAISAKSDPLIGLKENVILGKLIPAGTGLARYNKIHV
EPTPEAMANADYVEADFQVGEVDEAFLASLDSIDFGAPFSDSDFR
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgacgccaatgctttcgacaagcttcacattggactggcgactcttgacgacatc
cacgagtggagccacggcgaagtaaagaaaccagaaacgatcaactaccgtacgctcaag
ccggaaaaggacggtttgttctgtgagcgtattttcggtcctacgcgggactgggagtgt
gcgtgcggtaagtacaagcgcgtgcgttacaagggcatcgtgtgtgagcgatgcggagtt
gaggtagcgcgtgcggacgtgcgtcgtgagcgcatgggccacattgagcttgccgctccg
gtgacacacatttggtacttcaagggcgttccgtcgcgccttggatacctgcttgatctt
gcaccgaaggatcttgagaaggtcatttattttgcggcctacatgatcactgaggttgat
gaggaggctcgccgcgaggatctgccgaccctgcgtaacgagcttgaggttgagcgtaag
aacattgaggctcgccgcgaggccgacattaatgcccgcgcggaggctcttgaggcccgt
cttgccgagatggaagagaagggtaataagcaggagactcgcgaccgcgagcgccgtgct
ggtgagcgtgacatgaacgcgatccgtcgtggctacgagcagaggcttgcccgccttgaa
gaggtgtgggataagttcatgaacctgcaggtcggtgacctggagggtgacgagctcatt
taccgcgacatgcaggctcgctacggcatttacttcaagggcgcgatgggtgcggccgct
attcagaagcgtctgcagtctttcgatcttgaggctgaagctgaggctctgcgcgagatt
attgctaccggtaccggtcagcgtaagacgcgtgcgcttaagcgtttgaaggttgtgaac
gcgttcctcactacggataacgttccagaggcaatggttctggacgctatcccggtgatt
ccgccggacttgcgtccgatggtgcagcttgatggtggccgcttcgcgacctcggacctc
aatgatctgtaccgccgcgtgattaaccgcaacaaccgtttgaagcgtcttcttgagctg
aacgctccggaaatcatcgtgaataacgaaaagcgcatgctgcaggagtctgtggatgcc
ctgtttgacaatggccgccgcggccgcccggtctccggtccgggtaaccgtccgctgaag
tcgctgtccgacatgcttaagggtaagcagggtcgtttccgtcagaaccttcttggtaag
cgcgtggactactcgggccgttcggttattgtggttggtccgcagttgaagcttcaccag
tgtggtctgccgaagcagatggcgttggagctgttcaagccgttcgttatgaagcgtctg
attgaaaagaagtatgcccagaacatcaaggccgcgcagcgtaaggttgatcgttcgcgc
cccgaggtgtgggacgttctcgatgaggttattcgcgagcacccagtgctgctgaaccgt
gcgcctacgcttcaccgccttggcattcaggcgtttgagccgcagcttattgagggtaag
gctattcagctacacccgctggtttgcggcgcgttcaacgctgacttcgatggtgaccaa
atggctgtgcaccttccgcttggtgcggaggcgcaggctgaggcgcgcgtcctcatgctg
tcttcgaacaacattttgaagccgtctgatggtcgtccggtgaccatgccgtcgcacgac
atgatcattggtttgtaccacctcacgcttaacccggattcttcgattccagttccgcgt
aatgaggagacgggtgagccgatcctgcctcacttcagctctgttgccgaggcaatcatg
gcgtttgaccgcggtgacctgcatctgaatgcgcgtgcgattattcgtttcacggatatt
gtgccgccgaagaactgggttgctccggaaggttggagcgagggcgatccgatcgagctt
gaaacttcgcttggtcgtgccctgttcaacgatcttctcccggtggagtacccctacgtt
gaggccgttgtgaacaagaaggttctcggcaaggttgtcaacgaccttgcggagctttac
ccgaaggttctggttgccgagtcgcttgacgcgctgaaggctgcgggcttctactggtct
acctggtctggcctcaccattgcgtttgatgacatcatgacgccgccaaataagggtgag
attcttgcccagcacgaggcagcagcagcacggattcagcgcgactacgagatcggtaag
atcacggaagacgagcgttacaacgcgctggttgaaatctggaccactgcaactcgtgag
gttgcagacgcgatggaagaggcgttccctgagcgcaacaacctgttccagatggttgat
tcgggtgctcgtggtaactgggatcaggtgcgccagctggccggtatgcgtggcctcgtg
tcggacccgaagcaaaagcttattgagcgtccgattaaggctaactaccgcgagggcctc
acggttctggagtactttattgcaacccacggtgctcgtaaggggcttgctgatacggct
cttcgtaccgctgactccggctacttgacgcgtcgtcttgttgacgtgtcgcaggatgtc
gtggtgcatgaggaagactgtggcactcgtcgcggtatcaacatggacattgccgagctg
gacgaagagggcaaggcacaccgcctcgacactgttgagaccactgcttacgcgcgtacg
ctcgcggctgacgcgaaggacgctgagggcaacgtggttgctgaggcaggttcggatgtg
ggcgacgtcttgatcgacaagctcgtggatgcgggtatcaccaccattaaggtgcgttcg
gtgctttactgtgagtccgctacgggtacgtgtgcggcttgctacggccgttcgctcgcg
tcgggcaagcgcgtagacatcggcgaggccgtgggcattatcgcggcacagtcgattggt
gagcccggtactcagctgacgatgcgtaccttccacaccggtggtgttgcatcggctgcg
gatattacgcagggtctgccgcgtgtgcaggagctctttgaggctcgcaccccgaagggt
gaggcaacgatggcagaggcagcgggcaaggtccacatcgatgatactgatcccaccaac
cgcaagatcgtgatcactcgtgatgatggcgaggccgaccttgtggttgaggtttcgcgt
cgccaagaactcctcgtggaggagggcgagcacatcgcggttggcacgaagctcaccacg
ggtcgtcttgacccgaagaagatgcttcgcatccgcaacaagtcggagacacagcgtcag
ctggttgatgaggtgcaggaagtgtaccgctcgcagggcgtggacattcactccaagcac
attgaggtgattgttcgccagatgctgcgtcgcgtcacggttctggatgatccgggcgac
accgagcttctgcccggtcagcttgttgacgaggtcgatttcaagcgcatcaaccgtgca
actgtggctcagggcggtcgcccggctgcgggtcgtccggagctgatgggaatcacgaag
gcttcgctggctacggattcgtggcttgctgcagcttcgttccaggagaccacgaagatc
ttgactgaggctgctatcagcgcgaagtcggatccgttgattggtctgaaggagaacgtg
attctcggtaagctcatcccggccggtacgggtcttgcgcgctacaacaagattcacgtg
gagcccacgccagaggcgatggctaacgcggattacgttgaggctgatttccaggttggt
gaggtcgatgaggcgttcctcgcttcgctcgactcgatcgactttggagctccgttctcc
gatagcgacttccgctaa
DBGET
integrated database retrieval system
