Geobacter sp. SVR: GSVR_03940
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Entry
GSVR_03940 CDS
T10318
Symbol
hup_1
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
gev Geobacter sp. SVR
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gev03032
]
GSVR_03940 (hup_1)
03036 Chromosome and associated proteins [BR:
gev03036
]
GSVR_03940 (hup_1)
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_03940 (hup_1)
DNA replication proteins [BR:
gev03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GSVR_03940 (hup_1)
Chromosome and associated proteins [BR:
gev03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GSVR_03940 (hup_1)
DNA repair and recombination proteins [BR:
gev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GSVR_03940 (hup_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
HU-DNA_bdg
HU-CCDC81_bac_1
HU-CCDC81_euk_1
MetW
Baseplate_J
Motif
Other DBs
NCBI-ProteinID:
BCS52086
LinkDB
All DBs
Position
complement(381020..381286)
Genome browser
AA seq
88 aa
AA seq
DB search
MTKAEFVAAVATKTGLTKAAAAEAVDAFTGTVAELLKAGDKVTFPGFGTFSVSERAARTG
RNPQTGAEIKIAASKSGKFSAGKDLKGL
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcagaatttgtagcagcagtagcaaccaaaacaggcttgaccaaggctgca
gcagccgaagccgtcgacgctttcaccggtaccgtcgctgaacttctcaaagccggcgac
aaggtcaccttccccggattcggcacgttcagcgtatccgagcgtgcagcacgcaccggc
cgcaacccgcagaccggggctgaaatcaagattgcagcctccaagagcgggaaattcagc
gccggcaaggacctgaaggggctctaa
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integrated database retrieval system
