Geobacter sp. SVR: GSVR_06010
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Entry
GSVR_06010 CDS
T10318
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gev Geobacter sp. SVR
Pathway
gev00470
D-Amino acid metabolism
gev00550
Peptidoglycan biosynthesis
gev01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSVR_06010 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GSVR_06010 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
GSVR_06010 (murD)
Enzymes [BR:
gev01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GSVR_06010 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
Precursor biosynthesis
Amino acid ligase
GSVR_06010 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Shikimate_DH
XdhC_C
Pyr_redox
NAD_binding_7
AdoHcyase_NAD
Mur_ligase
HcgC
Pyr_redox_2
DAO
Ldh_1_N
NAD_binding_8
CbiA
adh_short
KARI_N
Motif
Other DBs
NCBI-ProteinID:
BCS52293
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All DBs
Position
627128..628468
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AA seq
446 aa
AA seq
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MELKDKNILVVGLAKTGVACARFLAKKGARVTVTDMRDETALTGQLAELAAYKVRMVLGR
HDQADFTSSDLIVVSPGVPQDHPLLAAATAAGVEIVSEIELAGRFIDVPLAAITGTNGKT
TTTTLLGAIFKHNGYHTFVGGNIGNPLIELVESRQMVDQVVAEISSFQLEWIRTFRPAVA
ALLNLSEDHLDRYPSYQAYIDAKLRIFENQTAEDFAVVNRDDPLVWQHAQHLKARLFPFS
RTQELEEGIFYRDGVITYRHDGHEECFPIAAIRLQGVHNRENIMAALACALLLGCRADEA
FETVLCFESLHHRMEFVREVNGVGYYEDSKATNVGSVQKALESFDNITLIAGGKDKGGSY
APLAALVQERVRHLVLIGEATDRMQAELGHLTDTLRAATLEDAVALAARVTQAGGTVLMS
PACSSFDMFKDYEERAQRFIAAVNAL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaactgaaagataagaacatactggtggtcggcctggcaaaaaccggcgtggcctgt
gcgcgtttcctggcgaaaaagggagcccgggtgaccgtgaccgatatgcgcgatgaaacg
gcgctgacgggccaactggccgagctggcggcgtataaggtccgtatggtgctggggcgc
cacgaccaggccgactttacctccagcgacctaatcgtggtttcgcccggcgttccgcag
gatcacccgctgctggctgcagccacagccgcaggggtcgagatcgtcagcgagatcgag
ctggccggacgtttcatcgatgttccgctggcggccatcaccggcaccaacggcaagacc
accaccaccaccctgctgggggcgatcttcaagcacaacggttatcacacctttgtgggg
ggtaacatcggcaatccgctgatcgagctggtggaatcccgtcagatggtggaccaggtc
gtggccgaaatcagctccttccaactggagtggatcagaaccttccggcctgccgtggcg
gcgctgctcaacctgagcgaagaccatctggaccgttatcccagctaccaggcctatatc
gatgccaaactgcgcatcttcgagaaccagaccgccgaagactttgccgtggtcaaccgc
gacgacccgctggtctggcaacatgcccagcacctcaaggcgcggctgttccccttcagc
cgtacccaggagctggaggagggcatcttctaccgcgacggcgtgataacctaccgtcac
gatggacatgaggagtgctttcccatcgccgctatccggctgcagggggtccataaccgg
gaaaacatcatggcggccctggcatgtgcgctgcttctgggctgccgcgctgacgaggct
ttcgagaccgtgctctgcttcgaatcactgcatcaccgcatggagttcgtgcgggaagtc
aacggagtcggctactacgaggacagcaaggccaccaatgtcggcagcgtgcagaaggcg
ctggagagcttcgataacatcaccctgattgccggcggcaaggacaaagggggctcctat
gcacccctggcagccctggtgcaggaacgggtgcgccacctggtgctgatcggcgaggct
accgaccggatgcaggccgaactgggtcaccttaccgatacgctcagggccgccactctg
gaggatgcggtcgcgctggcagcacgggtcacgcaagcggggggcacggtgctgatgtct
cctgcctgttccagtttcgatatgttcaaagattacgaggagcgcgcccagcgcttcatt
gcagcggtgaacgcgctgtaa
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