Geobacter sp. SVR: GSVR_06960
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Entry
GSVR_06960 CDS
T10318
Name
(GenBank) hypothetical protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
gev Geobacter sp. SVR
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gev01002
]
GSVR_06960
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
GSVR_06960
Peptidases and inhibitors [BR:
gev01002
]
Cysteine peptidases
Family C82
GSVR_06960
Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GSVR_06960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
Ldt_C
LysM3_LYK4_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BCS52388
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Position
complement(730178..731410)
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AA seq
410 aa
AA seq
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MAALLCLSPSARADYRSEASEIISRLGRGNMPQLSREGVDAVGAAFTTAELFFRQNNLKM
SEQYYLLAIQTAKALDSSAAVSPTPGPQIEEAPPLQAPSIEQALPAEESIPSAPAQAGTA
AAGAHGEPAGREALEGFLSGKLVGATNVYIVEKGDTLRLIAAKLGVSRQHLARLNNIDPR
SPLKIGRRLKYNNCKIVPLLVQDGIVINIPDRTLYFFKKGELVVTVPVALGIARKDKKYD
WTTPVGKFKIIAKQKDPVWYVPSSIRSEMQDHGKEAVASIPPGPTNPLGKYALKTSLPGI
LIHSTTRPGSIYSFASHGCIRVYPEQMEDVFREIKVNTPGEIIYRPVKVAVTENGRVFLE
VHQDVYGKSAGLAAEAKRMLDKSNLSNRVDWNKVESVIRLKAGQAEDVTL
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcagcactcttgtgcctgagcccctctgcccgcgcggactaccgcagcgaagccagc
gaaatcatttccaggcttggccgggggaacatgccccaattatcgcgcgaaggggtcgat
gctgtgggtgcggccttcactacggcagagctgttcttcagacaaaataacctcaagatg
tctgagcagtattatctattggccattcaaacggccaaggctctcgactcctctgcggct
gtctccccaacaccgggcccgcagatcgaggaagcccccccgcttcaggctccatctatc
gaacaggccctcccggcagaagaatctatcccctcggctccagcgcaggcagggacggca
gctgcaggtgcacacggtgaaccggcgggtcgcgaagctctcgaaggttttctgtcaggg
aaactggtgggggccaccaacgtgtacatcgtggagaaaggggataccctgcgcctgatc
gctgccaagctgggcgtcagccgccagcatctggcccgtctgaacaatatcgatccccgg
tcgccgctcaagatcggccggagattgaaatacaacaattgcaaaatcgttcccttgctt
gtacaggatggcattgtcatcaatatccccgaccgcacgctctatttcttcaagaagggc
gaattggtggtgaccgtgcctgtcgctcttggcattgccagaaaagataagaagtatgac
tggacgacaccggtggggaaattcaagatcatcgccaagcagaaggatccggtctggtat
gtaccgtcgtcgatcagatcggaaatgcaggatcatggcaaggaggcagtggccagtatt
cctccgggcccaaccaacccgctgggaaagtatgccctcaagacctccctgcccggcatc
ctgatccacagcaccaccagaccgggatcgatctacagttttgccagccacgggtgcata
cgggtatatccggaacagatggaagatgttttcagggagataaaggttaatacgccggga
gagataatataccggccggtcaaagtggccgtcactgaaaacgggcgggtatttctcgaa
gtgcatcaggatgtctatggcaaaagcgcggggctggctgccgaggcgaaacgcatgctc
gataaaagcaacctctcgaaccgcgtggattggaataaggtggaatcggtgatccggctc
aaggccgggcaggccgaggatgtaaccctgtaa
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