Geobacter sp. SVR: GSVR_12540
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Entry
GSVR_12540 CDS
T10318
Symbol
degP
Name
(GenBank) peptidase
KO
K04771
serine protease Do [EC:
3.4.21.107
]
Organism
gev Geobacter sp. SVR
Pathway
gev01503
Cationic antimicrobial peptide (CAMP) resistance
gev02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GSVR_12540 (degP)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
GSVR_12540 (degP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gev01002
]
GSVR_12540 (degP)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
gev03110
]
GSVR_12540 (degP)
Enzymes [BR:
gev01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.107 peptidase Do
GSVR_12540 (degP)
Peptidases and inhibitors [BR:
gev01002
]
Serine peptidases
Family S1: chymotrypsin family
GSVR_12540 (degP)
Chaperones and folding catalysts [BR:
gev03110
]
Other chaperones and cochaperones
DegP / HtrA
GSVR_12540 (degP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin_2
PDZ_6
Trypsin
PDZ_2
PDZ
Peptidase_S46
GRASP55_65
LSM
Peptidase_S29
Peptidase_S7
BRAP2
DUF2868
Motif
Other DBs
NCBI-ProteinID:
BCS52946
LinkDB
All DBs
Position
complement(1381162..1382586)
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AA seq
474 aa
AA seq
DB search
MPALITSIARLVAIAVVCTLAVPSFSAATATLPDFVELSKRLKPTVVNIRTVKNIKPKQR
TRRSPNTQQSPYDNFFDEFFGQFFDQNQQRPRREQNLGSGFIISSDGYILTNFHVVNGAD
EVLVKLADGRELKGQIKGGDEKFDLALIKITDKEKVPALELGDSDKLEVGEWVMAIGNPF
GLSQTVTAGIVSAKGRVIGSGPYDDFIQTDASINPGNSGGPLFNAEGKVVGIATAIVANG
KGIGFATPINMAKAIVDQLRETGKVTRGYLGVQIQKLTPELAKSFNLDADKGALVADVIK
GSPAEKAGIKTGDIILQYEGKPIVEYTELPRMVAATPLDKKVKITIFREGQKSEVVATID
KLKEEAEGEAAAKGEEGQANDKLGFTVSELTKDLAARFGYAEGKGLVITEVKPGSPADDT
GIPPGTLLLEINGQRPTTLEQYNKLVAQLKSGDVTRLLVKLPDGSVHYVAMTLP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcacttatcacgtcgattgcacgcctggttgccattgctgtggtatgcaccctg
gcagtaccgtcattttccgcagccacggccaccctgcccgatttcgtcgaactttccaaa
cggctcaaacctacggtggtcaacatccgcacggtcaagaacatcaagcccaagcagcgc
acgcgacgctccccgaacacgcagcagagcccctacgacaatttcttcgacgaattcttc
ggacagtttttcgaccagaaccagcagcgtccgcgccgtgaacagaacctgggctcaggc
ttcatcatcagcagcgacggctacatccttaccaacttccatgtagtgaacggcgccgac
gaggtcctggtgaaacttgccgacggccgggaactgaaagggcagatcaaggggggggac
gagaaattcgatctggctctgatcaagatcaccgacaaggagaaggtccctgcgctggag
ctgggtgacagcgacaagctggaggtgggggaatgggtgatggcgatcggcaaccccttc
ggtctctcgcaaacggtgaccgccggtatcgtcagcgccaaggggcgcgtgatcggcagc
ggtccctatgacgatttcatccagaccgatgcctcgatcaatcccggcaactccggtgga
ccgctgttcaatgccgaaggaaaagtagtcggcatcgccaccgccattgttgccaatggc
aaggggatcggctttgccaccccgatcaacatggccaaagccattgtcgaccaactgcgc
gaaaccggcaaggtcacccggggctatctgggggtacagatccagaagctgacacccgag
ctggcgaagtcgttcaacctggatgccgacaagggggcgttggtggctgacgtgatcaag
ggcagtccggccgaaaaggcaggcatcaaaaccggtgacatcatcctgcagtacgaaggc
aagccgatcgtcgagtacaccgagctgccccgcatggtggctgccacaccgctggacaaa
aaagtcaaaatcaccatcttcagggaaggacagaagagcgaggtggttgccacgatagac
aagttgaaggaggaggctgaaggcgaggccgccgccaagggagaagagggacaggccaac
gacaagctcggttttacggtgagcgaactcaccaaggatctggccgcccgcttcggctac
gccgagggcaaggggctggtgatcacggaggtcaagcccggctcaccggccgatgatacc
ggcatcccgccgggtacactgctcctcgagatcaacggacagcggccgaccacccttgag
cagtacaacaaactggttgcccagctgaagagcggcgacgtgacccggctgctggtcaag
ctgcccgatggaagcgtgcactatgtggccatgaccctgccgtaa
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